Silurus meridionalis (southern catfish): 124400907
Help
Entry
124400907 CDS
T08004
Symbol
cad
Name
(RefSeq) CAD protein
KO
K11540
carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:
6.3.5.5
2.1.3.2
3.5.2.3
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00220
Arginine biosynthesis
smeo00240
Pyrimidine metabolism
smeo00250
Alanine, aspartate and glutamate metabolism
smeo01100
Metabolic pathways
smeo01240
Biosynthesis of cofactors
Module
smeo_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
124400907 (cad)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
124400907 (cad)
00220 Arginine biosynthesis
124400907 (cad)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124400907 (cad)
Enzymes [BR:
smeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.2 aspartate carbamoyltransferase
124400907 (cad)
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.3 dihydroorotase
124400907 (cad)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
124400907 (cad)
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
124400907 (cad)
Metallo peptidases
Family M38: beta-aspartyl dipeptidase family
124400907 (cad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
GATase
CPSase_sm_chain
OTCace_N
OTCace
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
DHOase
ATPgrasp_Ter
Amidohydro_1
RimK
ATP-grasp_3
DJ-1_PfpI
Peptidase_C26
GARS_A
GSH-S_ATP
Motif
Other DBs
NCBI-GeneID:
124400907
NCBI-ProteinID:
XP_046728665
LinkDB
All DBs
Position
18:21409134..21429809
Genome browser
AA seq
2225 aa
AA seq
DB search
MSIIMASLILEDGTTYKGRLFGANTSVSGEVVFQTGMVGYPEALTDPSYKAQILTLTYPL
IGNYGVPSDTPGEFGLSKWFESAKIHAAALIVGEVSQDPSHWNSNKSLEKWLKEHGVPGL
QGVDTRSLTKKIREKGTMLGKLVVDGTIAESIPFDNPDNRNLVKDVSLKEPRVFNMDGRL
RIVAVDCGIKYNQIRCLCARGAQVTVVPWDYPLNAEDFDGLFISNGPGDPKFCKETIENL
KKIVCVEKPKPVFGICLGHQLLSLVIGAKTYKMKYGNRGHNQPCIHKGTERCYITSQNHG
FAVDPQTLPEDWDVLFTNANDHTNEGIVHNYKPLFSVQFHPEHMAGPTDLVSLFDVFLDV
VRDAKEGRAGNSVKERLTQHLTFPGSPKPEDFVRPRKVLILGSGGLSIGQAGEFDYSGSQ
AIKALKEENIQTILINPNIATVQTSKGLADKVYFLPITPDYVTQVIKNERPDGVLLAFGG
QTALNCGVELTKLGILEKYNVRVLGTPVASIEMTEDRKIFVEKMEEIDEHVAPSEAAMSV
EQAVAAAERLGYPVLIRSAFALGGLGSGFANNKEELIALVMQALAHTSQVLVDKSLKGWK
EIEYEIVRDAYDNCITVCNMENIDPLGIHTGESIVVAPSQTLNDYEYNMLRSTSIKVIRH
LGIVGECNIQYAVNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLGLGIPLPVL
KNSVTNSTTANFEPSLDYCVVKVPRWDLSKFLRVSTKIGSSMKSVGEVMAIGRSFEEAFQ
KALRMVDENCVGFDRTIKPVSEQELQIPTDKRIFVLAAALYANYSIDRLYELTKIDRWFL
YKMKNIVDHEKLLETYNQDESAMPTEVMRRAKQLGFSDKQIALSVQSTELAVRKLRQDWK
ILPMVKQIDTVAAEWPAYTNYLYMTYNGTESDVAFEEPHVMVIGSGVYRIGSSVEFDWCA
VGCIKELRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYEVENPEGVILSM
GGQLPNNIAMSLHRQQCRILGTSPEFIDSAENRFKFSRMLDTIGISQPRWKELSDTESAM
QFCEAVGYPCLVRPSYVLSGAAMNVAYSDSDLEKFLSSAVAVSKEHPVVISKFIQEAKEI
DVDAVACDGEVIAIAVSEHVENAGVHSGDATLVTPPQDINQKTMERIKLIVHAIGQELQV
TGPFNLQLIAKDDQLKVIECNVRVSRSFPFVSKTLGVDLVALATQVIMGQEVEAVGLMTG
NGIVGVKVPQFSFSRLAGADVVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPKKNI
LLSIGSYKNKSELLPTIQALESLGYNLYASLGTADFYTEHGVKVMAVDWPFEEESDCPNK
DKQRNIMDYLEENHFDMVINLSMRNAGGRRLSSFVTKGYRTRRMAVDYSVPLIIDIKCTK
LFVQALRQIGQAPPIKTHIDSMTSQKLIRLPGLIDVHVHLREPGATHKEDFSSGTAAALA
GGITMVCAMPNTNPAVIDPSSLALVQKLAKAGCRCDYALYAGAVSDNATILPSIANATAG
LKMYLNDTYSTLKMDNVSLWMEHFEKWPKHLPIVAHAEKQTVAAILMVAQLYQRPVHICH
IAKKEEILIIRAAKQKGIQVTCEVAPHHLFLCEDNVSDLGDGRAQVRPMLGTREDMEALW
ENLDIIDCFATDHAPHSLEEKDSEKPPPGYPGLETMLPLLLTAVSEGRLTVDDIVKRLYE
NPAHIFSLPLQENTYVEVDLEQEWIIPKHMQFTKSKWTPFEGMRVKGKVMRVVLRGEVAY
IDGQVLVPPGYGEDVKTWAVPPNQSTAPEASKEIQKTPEHPRQATQGESLRTRAASPRRA
AGERFMLPPRVHHASDPGLPPELAPVPELCSHPPPLVRILSPQSIQTPVVSHLQTSPLLH
PLVAQHILSARQFTKEQMSHLFNVAHTLRLMVQKERSLDILKGKVMASMFYEVSTRTSSS
FAAAMQRLGGSVVHFSESTSSTQKGESLADSVQTMSCYADVIVLRHPVPGAVEKAAKHCR
RPVINAGDGVGEHPTQALLDIFTIREELGTVNGMTITMVGDLKHGRTVHSLARLLTQYRI
TLRYVSPKNLSMPHEIVDFVASKGIKQEEFSSIEEALPDTDVLYITRIQKERFASEDEYN
ACFGKFILTPHIMTGAKRKMVVMHPLPRVNEISVEVDTDPRAAYFRQAENGMYIRMALLA
TVLGR
NT seq
6678 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcatcatggcatctctgatcctcgaggacgggaccacgtataaaggccgtctt
tttggtgccaatacttcagtgtctggagaagttgttttccagacaggaatggtgggctac
cctgaggccctcactgacccctcgtataaagcccagattctgactttaacctacccgctg
attgggaactacggcgtccccagtgacacccctggtgaatttgggcttagcaagtggttt
gaatctgccaagatccatgctgctgctctcatcgttggagaagtttctcaggatcccagc
cactggaactcgaacaagtctctggagaagtggttgaaggagcatggtgttcctgggctg
cagggggtcgacacgcgttctttgaccaaaaagatccgggaaaaaggaaccatgctggga
aagctcgtggtggatgggaccatagctgaaagcataccttttgacaatcctgataatcgg
aacttggtgaaagacgtgtctttgaaagagcccagggttttcaatatggacggcaggtta
aggattgtcgcggttgactgcggtattaagtacaatcagatccgctgcttgtgcgccaga
ggtgcacaggtcaccgtcgttccttgggattatcctctgaatgccgaagacttcgatgga
ctctttattagtaacggtcctggtgaccccaagttctgcaaggagactatagaaaacctg
aaaaagattgtatgtgtggaaaagcccaaacctgtgtttggaatttgcttgggtcatcag
ctgctctctttggttatcggggcaaagacgtacaaaatgaaatacgggaatcgtggccac
aaccaaccatgcatccataaaggtacagaacgttgctacatcacatctcagaaccacgga
ttcgcagtggacccccaaacccttcctgaagactgggatgttctctttaccaacgcgaat
gaccacacgaacgagggcattgtgcacaactacaagcctctcttcagtgtacagttccac
cccgagcacatggccggacccacagacctggtgagccttttcgatgtttttctggatgtc
gtccgggatgccaaagagggcagagctggcaattcagtgaaggaaaggctgactcagcat
cttaccttccctggatcgccaaagccagaggactttgttcggccccgaaaagtgctcatt
ctgggttctggaggtctctctattggacaagctggagaatttgattattctggctctcag
gcaattaaagctcttaaagaagagaacatccagacgattctcatcaaccctaacattgct
acagtgcagacctccaaaggcctcgctgacaaagtctacttccttcccatcaccccagat
tatgtcacacaggtgatcaagaacgagcgtcctgatggagtcctgctggcgttcgggggt
cagacggctctgaactgcggagtggaactgaccaagctgggaattcttgagaagtataac
gtgagagttttgggaacccctgtggcctctatcgagatgaccgaagacaggaagatcttt
gtggaaaaaatggaggagatcgacgagcacgttgcaccgagcgaggcagcgatgtccgtg
gagcaggcggtagctgcggctgagaggctcgggtaccctgtcctgatccgctcggcgttt
gcgctgggaggcctgggctcaggattcgccaacaacaaagaagagttgatcgctctggtc
atgcaagccttagcccacacgtcgcaggtcctcgtggacaagtccctcaaaggctggaag
gaaatcgagtacgaaatcgtacgagacgcttacgacaactgcatcacggtttgtaacatg
gagaacatcgatcctctgggaatccacacgggcgagtcgatagtcgtggctccgagtcag
acgctgaacgattacgagtacaacatgctgaggagcacgtccatcaaggtcatccgccac
ctggggatcgtgggcgagtgcaacattcagtatgccgtcaatccggaatccgagcagtat
tacatcatcgaagtgaacgcccgtctctcccggagctccgctttggccagcaaggctaca
ggataccccctggcctacgttgctgctaaacttggactgggaatccccctgcctgtcctt
aaaaactccgtcaccaattccacaaccgcaaactttgagccgagtcttgactactgtgtg
gtgaaggttcctcgctgggacttgagcaagttccttcgggttagcaccaaaatcggaagc
tccatgaagagcgttggagaagtgatggccatcggacgaagctttgaggaggctttccag
aaagctctccggatggtggatgagaactgtgttgggtttgaccgcaccatcaaaccggtt
tctgagcaggagcttcagatccctacagacaagcgtatatttgttctggcggcagccctg
tatgctaactacagcatcgaccgcctgtatgagctgaccaaaatcgaccgctggttcctg
tacaagatgaagaacatcgtggatcacgagaagctcctggagacctataaccaggatgaa
agtgccatgccgaccgaggtgatgagaagggcaaagcagctgggcttctccgacaaacag
atcgctctctccgttcaaagcactgagctggccgtgagaaagctgaggcaggattggaag
attctgccgatggtcaagcagatcgacaccgtggctgccgagtggcctgcttacaccaat
tacctctacatgacgtacaacggcacggagagcgacgtggcattcgaggaacctcacgtc
atggtgatcggatccggtgtctaccgcattggcagcagtgtcgaattcgattggtgtgcc
gtgggatgcatcaaggagcttcggaagatgggttacaagactataatggtgaactacaat
cccgagacggtcagcacggactacgacatgtgcgacaggctctatttcgacgagatctct
tttgaggtggtaatggacatatacgaagtggagaacccggagggagtgattctttccatg
ggaggccagctccccaacaacatcgccatgtccttgcacaggcagcagtgccgcatcctg
ggcacctcgccggagtttatcgactccgctgagaaccggttcaaattttccaggatgttg
gacaccattgggatcagccaacctcgctggaaagagctttctgataccgagtcggcgatg
cagttctgcgaggcggttggatacccatgtctggtgaggccgtcttacgtcttaagcgga
gccgccatgaacgtcgcatactccgatagcgacctggagaagttcctgagcagcgccgtc
gccgtttccaaagagcacccggtggttatctccaaatttatccaggaggccaaggagatc
gacgtggatgccgtagcgtgcgacggcgaggtcatcgccatcgccgtgtccgagcacgtg
gagaacgcaggggtgcactccggggacgctacgctggtcacgccaccccaggacatcaac
cagaagaccatggagcgcatcaaactgatcgtgcatgccatcggacaagagctacaagtc
accgggccgttcaacttgcaactcattgctaaggacgaccagctgaaagtgatcgagtgc
aatgtccgagtctcacgctccttcccgtttgtctccaaaaccctgggtgtagatcttgtg
gctttggcaacccaggtcatcatgggacaggaagtggaagctgtaggactcatgactggg
aacggaattgttggtgttaaggttcctcagttctcgttctctcgtctggccggcgccgac
gtcgtgctgggtgtggagatgacgagcaccggcgaggtggcctgcttcggcgagaaccgt
tacgaggcttacctgaaagccatgctcagcacaggtttcaaaatccctaagaagaacatc
ctcctgtctattggcagctacaagaataaaagcgagctcctgcctacaattcaggctttg
gagagtcttggatacaacctgtacgccagtctggggactgctgacttctacactgaacac
ggtgtcaaagtgatggctgtcgactggccgttcgaagaagagagcgactgccctaacaag
gacaagcaaagaaacatcatggactacttggaggagaaccactttgacatggtgatcaac
ctgtccatgaggaacgccggcggacgtcgcttgtcctccttcgtgaccaaagggtaccga
acccggcgcatggcggtggactactccgtacctctgatcatcgatatcaagtgcaccaaa
ctttttgttcaggcgttgaggcagatcggtcaagctcctcccatcaagacgcacatcgac
agcatgacctcccagaaacttatccggttacctggcctcatcgatgttcatgtccacctc
cgagaacctggtgccacccacaaagaggatttctcctcgggcacggccgccgccctggca
ggaggcattaccatggtttgcgcgatgcccaacaccaaccctgctgtgatcgaccccagc
tctctagctctggtccagaagctggcgaaagcggggtgtcgctgcgactacgctttatac
gccggagccgtttcagataacgcgacgatcctgccgtctatcgcgaacgcaacggcgggg
ctgaagatgtacctcaatgatacttactccacgctgaagatggacaacgtttccttgtgg
atggagcatttcgaaaagtggccaaagcacctacccatcgtggcccacgccgagaagcag
accgtagccgccattttaatggtggctcaactctaccagaggcctgttcacatttgccat
attgccaaaaaagaggagattctgataatccgagccgcaaaacagaagggcatccaggtg
acctgcgaagtggctcctcatcacctcttcctgtgcgaagacaacgtgtccgacttgggg
gacggcagggcgcaggtgcgacccatgctaggcacccgagaggacatggaggcgttgtgg
gaaaatctggatatcatcgattgttttgctactgatcacgctcctcactcgttggaggag
aaggactctgaaaagcctcctccaggttacccgggtctggagaccatgctgcccctgctg
ctcaccgccgtcagcgaaggccgcctcaccgtcgacgacatcgtcaagcggctctacgaa
aacccggcacacattttctcgcttcctctccaagagaacacctacgtcgaggtggatctg
gagcaagagtggatcatcccgaagcacatgcagttcacgaaatcgaagtggaccccgttc
gagggcatgagggtgaaggggaaagtgatgagggtggtgctgagaggggaggttgcctac
atagacggacaggtcctagtgcctcccggttacggggaagacgtgaaaacatgggcagtg
cctcctaatcagtcaacggctcctgaagcatctaaggagatccaaaagactcctgaacat
cccagacaagcgactcagggtgaatctttgcgtacccgagctgcgagtccacgccgagca
gccggagagcgtttcatgcttccgcctcgagtccatcacgcgtccgatcccgggctgcca
ccagaattggctcctgttcccgagttgtgctcacatcctcctccgctcgtccgaatcctc
tcgcctcagagcatccagactccggttgtgtctcacctccagacttctcctctgcttcac
cccttagtggctcagcacatcctttctgcacgccagtttaccaaggagcagatgtcccac
ttgttcaacgtggctcacacacttcgcctgatggtccagaaagagaggagtctggacatc
ttaaagggtaaggtgatggcctccatgttctacgaggtgagcactcggaccagcagctct
ttcgcggcagcgatgcagcgcctcgggggatctgtggtgcacttcagcgagtcaacgtcc
tccacacagaagggcgagtccctggccgactcggtgcagaccatgagctgctacgccgac
gtgatcgtcctgcgtcatccagtgcctggagctgtagagaaagccgccaagcattgtcgg
aggccggtaataaacgccggtgacggtgttggagagcatcccacccaggccctgctggac
atcttcaccatccgcgaggagctcggcacagtcaacggcatgaccatcacgatggtggga
gatctgaagcacggcaggacggtgcattctttagctcggcttctgactcagtatcgcatc
acgctgcgctacgtttcccccaaaaacctcagcatgcctcatgagatcgtcgactttgtg
gcgtctaaaggaataaagcaggaggagttcagcagtattgaagaagcgctgcctgatacc
gacgtcctttacatcacacgcatacagaaagagcgtttcgcctccgaagacgagtacaac
gcgtgcttcgggaagtttatcctgaccccccacatcatgaccggagccaagaggaaaatg
gtggtcatgcatccactaccgagggttaacgaaatcagcgtggaggtggacacggaccct
cgtgccgcttatttccgccaggccgaaaacgggatgtacatccggatggcgcttctggcc
accgtcctcggacgctga
DBGET
integrated database retrieval system
