Silurus meridionalis (southern catfish): 124402420
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Entry
124402420 CDS
T08004
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3 isoform X1
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124402420 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124402420 (slc6a11b)
Transporters [BR:
smeo02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
124402420 (slc6a11b)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
124402420
NCBI-ProteinID:
XP_046731404
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Position
19:complement(7470885..7504276)
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AA seq
607 aa
AA seq
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MTADKPGPMVNGRHAEDAEAPRANPVHERGQWGSKLEFMLSVAGEIIGLGNVWRFPYLCY
KNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYATQVIEA
HLNVYYVVILAWAIFYLANCFTTELPWASCGHYWNTENCVDFNNASLANFTNPYSTSPVI
EFWERRVLSISSGIEHVGKLRWELALCLAVAWVICYFCIWKGPKSTGKVVYVTATFPYFM
LVILLIRGITLPGAADGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLTALGSYN
SYNNNCYRDCVMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESGPGLAFIAYPK
AVTMMPWSPLWAFLFFMMLIFLGLDSQFVCVESLVTAVVDMYPKTFRVGYRRELLILGMS
IASYILGLTMLTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGGDKFYSNIEDMI
GYKPIFFIKWCWKILTPGICSGIFLFFLIKYKPLKYNNVYTYPDWGYAIGWTMAMSSMIC
IPLGIIVQIWKTEGTFKERIKKLTTPSSDLRMRGHLSAKSPYAINDADAKMRVDGKISTI
TEKETHF
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgacaagcccgggcccatggtgaacgggaggcacgcggaggacgccgaggct
ccgcgcgcgaaccccgtgcacgagcgcggccagtggggcagcaagttggagttcatgctc
tcggtggccggagagatcatcggactcggcaatgtctggagatttccgtatctctgctac
aaaaacggaggcggtgctttctttgtgccttatgtcatcttcttcgtgtgctgcggtatt
cctgtgttctttttggagacagcgttaggccagttcaccagcgaaggaggaatcacatgc
tggagaaaagtatgtccactttttgagggtattggttacgcaactcaggtcattgaggcg
cacctgaatgtgtattatgtggttattttggcatgggcaatcttctacctggctaactgc
ttcaccaccgagctcccctgggcctcctgtggccattactggaacacagaaaactgtgtg
gatttcaacaatgccagtttggcaaatttcaccaatccatattccacctcaccagtcatt
gagttttgggagcgtcgtgtcctcagtatatccagtggaattgagcatgttgggaagctg
cgctgggaacttgctctgtgccttgcagtggcctgggtcatttgttatttctgcatatgg
aaaggtcctaaatcaactggaaaggtggtatacgtcactgcaaccttcccttattttatg
ttggtgatcctgcttattcgagggatcacacttcctggtgcagcagatggaatcaagttc
tacctttacccagacatctcaaggctctcagaccctcaggtatgggtggatgctggaact
cagatcttcttctcatatgccatctgtctaggatgtctgactgctctcgggagctataac
agttataataacaactgttacagggactgtgtcatgctatgctgcttgaacagcggcaca
agttttgtggcaggatttgccatcttctctgtgttaggtttcatggcttacgaacagaat
gtgccgattgaagctgtggcggaatcaggtccaggtttggcttttattgcatatccaaaa
gctgtgaccatgatgccgtggtctcctctgtgggcgttccttttcttcatgatgctcatc
ttcctcggtctagacagtcaatttgtgtgtgtagagagtcttgtaactgctgtggtggac
atgtaccccaaaaccttccgagtgggataccgtcgagagctcctgatcttagggatgtca
atagcttcatatatattgggtttaaccatgttgacagagggtggcatgtatgtgttccag
ttgtttgattcctatgctgccagtggtatgtgtttgctatttgtggccatatttgagtcc
atctgcatcggctgggtctatggcggtgacaagttttattcgaacatcgaggacatgatt
ggttacaagccaatatttttcatcaagtggtgctggaagatccttacccctggcatttgt
tcaggaattttcctcttcttcttgatcaagtacaagcccctgaaatacaacaatgtgtac
acgtatccagactggggttacgccattggatggacaatggcaatgtcctcgatgatctgc
atccccctgggcattatagtccagatctggaaaacagaaggaacctttaaggagagaatc
aagaagctgacaaccccaagctctgatttgaggatgagaggccacctcagtgcaaagagt
ccctatgccattaatgatgctgatgctaaaatgagggtggacggcaaaatctccaccatt
acggagaaggagacacatttctaa
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