Silurus meridionalis (southern catfish): 124403304
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Entry
124403304 CDS
T08004
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124403304 (smc4)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
124403304 (smc4)
Condensin II
124403304 (smc4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
THOC7
ZapD
Motif
Other DBs
NCBI-GeneID:
124403304
NCBI-ProteinID:
XP_046732938
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Position
20:14897099..14916249
Genome browser
AA seq
1292 aa
AA seq
DB search
MPSKTTKSSSVAKSRGKVYQDDSDDEMKEIKTHEVHADDQDARQSNDADGEAVDSRSLEE
ILGSIPPPPPPAMTNEPGAPRLMITHIVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKS
NVIDSMLFVFGYRAQKIRSKKLSVLIHSSDGHKDIQSCTVEVHFQKIIDKEGDDYDVIPD
SKFYVSRTAGKDNSSSYHINGKKATFKDVGTLLRSHGIDLDHNRFLILQGEVEQIAMMKP
KGQTEHDEGMLEYLEDIIGSCRLKEPINTLCRRVELLNEHRGEKLNRVKMVEKEKNALEG
EKNKAVEFLTLENDMFKKRSHLCQFYVHDLLQRAAEKEAEKQQIHEDTKGLTEKSTQLTE
EMKEKNEALKNVEKKMGKLTKFIESQKEKFTQLDLQDVEVREKLKHTKNKTKKLHKQLQK
DKEKLEEVKNIPASSEKIITEASAQKDMLEKDKVMEEAALAQVMECLKEETSGLQQEKEQ
KEKELLELSKAVNETRSQMDVAQSELDIYLSQHNTAVSQLNQAKDALQGTADTLRDRRAA
IKELKVKVPKCEQDLKRDEEELKQISEQDGQTQATVRDMRQKVEEAKSSLSSTRSRGKVL
DALMQQKLIGKIPGILGRLGDLGAIDEKYDIAISSSCGALDNIVVDTIDTAQKCVTFLKA
QNIGVATFIGLDKMKVWERNMKTISTPENIPRLFDMVKVKDDSVRPAFYFALRDTLVAKD
LEQATKVAFQKDKRWRVVTLQGQIIEQAGTMTGGGGRVMKGRMGSSIGTEVTQEQLDKME
SALKEKVVQLQGWQQRKQQLEESVHKQRRELRDMKNTLEKYTASIQSLEEQEIHLKSQMK
ELEANVIAAAPDKAKQKQMEKKLEAFKKNYEAASNKAGKVEAEVKRLHNLIVDINSHKLK
AQQDKLDKINKELDECSSAITKAQVAIKTAGRNLKKAEETVTRLETEIAENEKLMEELTE
QLKKLEDQAGEIMKSCQEAEEALPEVQEMHRGVLQEIKALQEQEHVLQKESLNVRLKVEQ
IDTAISECQNKIKHWEKESTKLALHSIDDKPAEELPKLTTEQLEAIKSPDVIKNEIALLE
DRCAQMKPNLGAIAEFKKKEELYLQRVAELDEITNQRDNFKRSCEDLRKQRLNEFMAGFN
IITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIYNLSGGEKTLSS
LALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMFEMAD
RLIGIYKTHNTTKNVGINPKTIVLKDVEVASG
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgaaaacaactaaaagctcttcggttgcgaagtcccgggggaaagtgtatcag
gatgactcggatgatgagatgaaggaaataaagactcatgaagtacacgcagatgatcag
gacgcacgacagagcaatgatgccgatggtgaagcggtggatagccggagcttggaggag
attctcggtagcatccctccacccccaccccccgcgatgaccaacgaaccgggcgctccc
cgcctcatgatcacacacattgtcaatcggaacttcaaatcatatgccggggagcagatc
ctggggccttttcataagcgcttttcctgcatcatcggcccaaacggcagcgggaaatca
aacgtgatcgactcaatgcttttcgtatttggatacagagctcagaaaatcaggtccaaa
aagctctctgtgcttattcacagctctgacgggcacaaggacatccagagctgcactgta
gaggtgcactttcagaagatcatcgacaaggaaggagatgactacgatgtcatccccgac
agcaagttttacgtttcaagaactgccggtaaagataattcctcatcctaccatatcaat
ggcaaaaaggcaaccttcaaagatgttggaactttgcttcgtagccatggcattgacctt
gaccacaaccgatttctcattttgcagggagaagtagagcagattgcgatgatgaagccc
aaaggacagacggagcatgacgaaggcatgctggaatacctggaggacatcatcggctcc
tgccggctcaaagaacccatcaacacgctgtgcaggcgagtggagctactgaatgagcac
agaggggaaaagcttaatcgtgtcaagatggttgagaaggagaagaatgctctggagggt
gaaaagaataaagcagtggaatttctcactctggagaatgacatgtttaagaagagaagc
catctctgccagttctatgtacatgatttgctgcagcgtgcggccgaaaaggaagcagaa
aaacaacagatccacgaggacaccaagggactgactgaaaaaagcacccagctcacagag
gaaatgaaggagaagaatgaagccctgaagaatgtggaaaagaaaatgggcaagctgacc
aagtttattgagagccagaaggagaagttcactcagttggaccttcaggatgtggaggtg
cgtgagaagctgaagcacaccaagaacaagaccaagaaactccacaaacagctgcaaaag
gacaaggaaaaattggaagaagtgaaaaatattcctgcaagcagtgaaaagataatcact
gaggcttctgcccagaaagacatgctagagaaagataaggttatggaggaagcagccctg
gcccaggtgatggagtgtctgaaggaggagaccagtggcctgcagcaggaaaaggagcaa
aaagagaaggagcttctggagctaagcaaagctgtgaatgagactcgctcgcagatggat
gttgctcagtccgagctggacatctacctgagtcagcacaacacagccgtttcacagctc
aaccaggctaaagacgctctacagggaactgctgacacactccgagacagaagagctgcc
atcaaagagctcaaggtcaaagtgccaaagtgtgagcaggatcttaaaagggatgaggaa
gagttgaagcaaatttctgagcaggatggacagacccaggctacagtcagggacatgagg
cagaaggttgaagaggccaagtcctctctgtcctccactcgtagccgaggcaaagtactc
gatgcgctcatgcagcaaaaactcattggcaagatccccggcatcttgggacgtctgggt
gatctgggagccattgatgaaaagtatgacattgcaatctcgtcaagctgtggtgcactt
gataatattgtggtggacaccatcgacaccgctcagaaatgtgtcaccttccttaaggcc
cagaatatcggagtggcgaccttcattggtctagacaagatgaaggtctgggagagaaac
atgaaaacgatttccacaccagagaacattccccgtttgtttgatatggtgaaagtaaag
gacgattcagtgcgtcctgccttttatttcgccctgagagacacactagtggctaaagac
ctggagcaggcaactaaagtggccttccagaaagacaaacggtggagagtggtcacactg
cagggacaaatcatcgaacaggctggcactatgactggaggaggaggacgtgtaatgaaa
ggcagaatgggctcttctattggcactgaagtcacacaggaacagctggacaaaatggag
agtgcattaaaagagaaggtggtgcagctgcagggctggcagcaaaggaaacagcagctc
gaggagagcgtgcacaaacagagacgagagctcagagacatgaagaacacgttggagaaa
tacacagccagcattcagagtcttgaggagcaagagattcacctgaagtctcagatgaag
gagctggaagcgaatgttatcgctgctgcccctgacaaagccaagcaaaaacagatggag
aagaagctggaagccttcaagaaaaattatgaggcagcatccaacaaggcaggaaaggta
gaagctgaggtgaaacgactccacaacctaattgtggacatcaacagccacaagctgaag
gcccaacaggacaaactggacaaaatcaacaaagagctagatgaatgctcttcagcaatc
accaaagcccaagtggccatcaagacagcaggacgtaatctgaaaaaggcagaggagact
gttacacgactagaaaccgagatcgcagagaatgagaaattgatggaggagctcacggag
cagctaaagaaactggaggatcaagcaggagagatcatgaagtcctgccaggaggctgaa
gaggcactgcccgaagtgcaggaaatgcatcggggtgtcctgcaggagatcaaggccctt
caggaacaagagcatgttttacagaaagagtcgctaaatgttcggctgaaagtggagcaa
atcgacactgccatctccgagtgtcagaataagatcaaacactgggaaaaagagtctaca
aagcttgctctgcactcgattgatgataaaccagcagaggaattgcctaagctgaccaca
gagcagttggaggccattaaaagcccagatgtcatcaaaaacgaaattgctcttttggag
gatcgctgtgcccagatgaagcccaatttgggagctatagcagagtttaagaagaaggag
gagctttatttgcagagggtggctgagctggatgagattaccaaccagagagacaatttc
aagaggagctgcgaagacctgaggaaacagaggctgaacgagttcatggctggttttaat
atcatcaccaacaaactcaaggagaattaccagatgttgacactggggggcgatgctgag
ctggagcttgtagacagtctggaccctttctctgagggcatcatgtttagtgtgcgtcct
cctaagaagagctggaagaaaatctataacttgtctggaggtgagaagaccctgagctct
ttggctttggtctttgcactgcaccactttaagcccacgcctctatacttcatggacgag
atcgacgctgcactggatttcaagaacgtgtccattgtggcctgctacatatatgaacaa
accaagaatgctcagttcatcatcatctctttgaggaacaacatgtttgagatggctgac
cgcctgatcggcatctataaaacgcacaacaccactaaaaacgtgggaatcaaccccaaa
accatcgtcctcaaagacgttgaggttgcatcaggataa
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