Sinorhizobium meliloti RMO17: DU99_29675
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Entry
DU99_29675 CDS
T03395
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smer
Sinorhizobium meliloti RMO17
Pathway
smer00040
Pentose and glucuronate interconversions
smer01100
Metabolic pathways
smer02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smer00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DU99_29675
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DU99_29675
Enzymes [BR:
smer01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
DU99_29675
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GFIT
Motif
Pfam:
TSP3_bac
Motif
Other DBs
NCBI-ProteinID:
AIM03351
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All DBs
Position
pSymB:complement(927039..928487)
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AA seq
482 aa
AA seq
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MTVSYQAHDVRAFGFTIARCLILAGLVCGSWVGFSRQALAQAALAEPLSPKLPDGRQRAF
PTAEGFGAGSLGGRGGKVIYVVNTNESGQGSLRACIEASGPRICIFRTGGTIVLREGSLV
VRHPFLTIAGETAPGGGIAIRNGETQIRPSIEIVTNDVIIRHIRLRPGPHAVKACCSGGL
GMYSSSAKDIMLDHISASWGSDETIDSEDASNFTWQWGIASEPLLRGGPGKDKRARNMLF
TKGGNVSVHHSLFAFGQFRNPLIKMKIPGAVADVVNNVFFSPKWQYVLSFGDEWARIQAN
VVGNYKIAGEKLRDDHMVHLFEESGRGHAIYLKDNYDEPYRTGASEDDTLVLAEKQRRFV
STSAFDAPAVRASAPEIAYEDVLAGAGATKPRRDAVDRRITEAVRNRSGRLLVNDPQDVG
GWPELDAGVPYPDSDMDGISDDWEVESGTDPADASDGRQDLDGDGWTNLEAFLHFMAGDT
AD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacggtaagctaccaagcgcatgacgtaagggcatttggtttcaccatagcgcgttgc
ctgattttggcggggttggtctgcggatcatgggtcggcttctcgcggcaagctctagcc
caggcggcactggccgagcctctttcacccaagcttccggacggcagacaacgcgccttt
cccacggccgaaggcttcggcgccggctctcttggaggccgggggggtaaggtgatctat
gtcgtcaacacaaacgaatcagggcagggctccttacgtgcgtgcatcgaggcatccggc
ccgcgcatttgtattttccgcacgggtggcaccattgttcttcgcgaaggatcgctggtc
gtccgacatccattcctgacgattgccggagagacggcgccgggcggcgggatcgccatc
cggaacggcgagacgcaaattcgtccttcaatcgaaatcgtgaccaatgacgtgatcatc
aggcacattcgtcttcgccccggtccgcatgccgtgaaggcttgctgttccggaggcctc
ggaatgtactccagctcggcgaaggacatcatgctcgatcatatctccgccagctgggga
tcagacgagacgatcgattcggaagacgcgagtaacttcacctggcagtggggtattgcg
agcgaaccgttgctgcggggcggccccgggaaagacaagcgtgcgcgcaacatgttgttc
acgaagggcggcaacgtctccgtgcatcactctctcttcgctttcggccagttcagaaac
ccgctgataaagatgaaaattcccggcgccgtcgccgatgtcgtgaacaacgtgtttttc
tcaccgaagtggcaatatgtcctaagcttcggcgatgaatgggcgcggatccaggctaat
gtggtcggcaactacaagatcgcgggggaaaagctgcgagacgatcatatggttcatctc
ttcgaagaaagcggacgcgggcacgcgatctatttgaaggacaattacgacgaaccatat
cgcactggcgccagcgaggatgacaccctcgttttggccgagaaacaaagaaggttcgtt
tcaacgtcggcattcgatgcaccggcggtccgcgcttctgcgcccgaaattgcttacgag
gacgtcctggcaggtgccggtgcgacgaagcctcggcgcgacgccgtcgatcgccgcatc
accgaggcggtcagaaatcgcagcggacgactgctcgtgaacgatccgcaggacgtcggc
ggttggccggaactcgatgccggggtgccgtacccggacagcgacatggacggtatctcg
gatgactgggaagtcgaaagcggcaccgatccggcagatgccagcgatgggcgacaggac
ttggatggcgacggatggacaaatctcgaagcgtttctccatttcatggcgggcgatacc
gcggattaa
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