Streptobacillus moniliformis: Smon_0949
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Entry
Smon_0949 CDS
T01125
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
smf
Streptobacillus moniliformis
Pathway
smf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Smon_0949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smf03400
]
Smon_0949
Enzymes [BR:
smf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Smon_0949
DNA repair and recombination proteins [BR:
smf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Smon_0949
Prokaryotic type
Smon_0949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_like
WD40_Prp19
Motif
Other DBs
NCBI-ProteinID:
ACZ01415
UniProt:
D1AYN9
LinkDB
All DBs
Position
complement(1034102..1035715)
Genome browser
AA seq
537 aa
AA seq
DB search
MELILKDSVNFNFNISDFALDPLNHTLITTGDSLNFLSNMKKIKSIKGKMKESLSIRFIK
YENQLFQSNDFYVICSNDKVYKVDGKRKKIVEEITLPLNNVENIIVSRTGKLAYISNGIL
YINDINLENLKAFPLTELGEGRFKIYISDENILIKHRKMHESSVNVLLFSLQHLKKIFEI
TSTTNHIYSKIIGLNYLSSTDDGYIEIWDILESQIKYSFKLSNYKITYIENDKNFYYFGN
INGELIITDLELNIVNKIKIFQDEIKKIKIFNSKIYILSFNNRMKVFDIINNENEFDDIV
NNFIHKYNIHESYKEFFNIDKVVKIKGFIDNLEADHIDYTPSSDKIFKALSQNISDIKVC
IMGKDPYFQKGVATGLAFEVNSESWMDEKVNTSLKNILKLIYKTYTGNMVDISEIRNSIL
KKEFDILPPNMIFKNWQNQGVLLLNSSLTTVIDKAGAHHKFWESIINELVEYISSRNTNI
TYLLWGNDAAIMEKHILNGEIIKHNHPAICGNLKNQNDFMLGKSFEKTKKYINWLGV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggaacttatattaaaagacagtgttaattttaattttaatatatcagattttgcatta
gatccattaaatcatacattgattacaactggagattctttaaattttttaagtaatatg
aagaaaataaagagtataaaaggaaaaatgaaagaatctttaagtattagatttattaaa
tatgaaaatcaactttttcaaagtaatgatttttatgttatatgttctaatgataaggta
tataaagtggatggaaaaagaaaaaaaatagtagaagaaataactttacctttaaataat
gttgaaaatataatagtaagtagaacaggtaagttagcatacatttcaaatggtattttg
tatataaatgatataaatttagaaaatcttaaagcatttcctttaactgaattaggagaa
ggaagatttaagatatacataagtgatgaaaatatattaataaaacacagaaaaatgcat
gaaagtagtgtaaatgttttattattttcccttcaacatttaaagaaaatatttgaaatt
acttcaactacaaaccatatttattctaaaattattggacttaattatctatcttcaact
gatgatggatatattgaaatatgggatatattagaatcacaaattaaatattcatttaag
ttgtcaaattacaagataacatatatagaaaatgataaaaatttctattattttggtaat
attaatggtgagttaataattacggatttagaattaaatatagtcaacaaaattaagatt
tttcaagatgagataaagaagataaaaatctttaattcaaagatatatatattatcattt
aataatagaatgaaagtatttgatattataaataatgaaaatgaatttgatgatatagta
aataactttatacataaatataacatacatgagagttacaaagaattttttaatattgac
aaggtagttaagattaaaggatttatagataatttagaagcagatcatatagattacaca
cctagttctgataaaatatttaaggcacttagtcagaatatttctgatattaaggtatgt
attatgggtaaagatccatattttcagaaaggtgttgcaactggacttgcatttgaggta
aatagtgaaagttggatggatgaaaaagtaaatacatcacttaaaaatattttgaagtta
atttataaaacatatacaggtaatatggttgatatatcagagataagaaatagcatatta
aaaaaagaatttgatatactgccacctaatatgatatttaaaaattggcaaaatcaaggt
gtactactattaaattcatcattaactacagttattgataaagcaggtgctcatcataaa
ttctgggaaagtattattaatgaattagttgaatatattagtagtagaaatactaatatt
acctatcttttatggggaaatgatgctgcaattatggaaaaacatattttaaatggagaa
ataattaaacataatcatcccgctatttgtgggaatttaaaaaatcagaatgactttatg
ttaggtaaatcttttgaaaaaacaaaaaaatatataaattggttgggagtgtaa
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