Sinorhizobium meliloti Rm41: BN406_02001
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Entry
BN406_02001 CDS
T02332
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi00470
D-Amino acid metabolism
smi00550
Peptidoglycan biosynthesis
smi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN406_02001 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BN406_02001 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smi01011
]
BN406_02001 (murD)
Enzymes [BR:
smi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BN406_02001 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
smi01011
]
Precursor biosynthesis
Amino acid ligase
BN406_02001 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
IlvN
2-Hacid_dh_C
NAD_binding_2
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
CCM68046
LinkDB
All DBs
Position
complement(2034011..2035402)
Genome browser
AA seq
463 aa
AA seq
DB search
MIPVTSFKGRKVALFGLGGSGLATAQALVSGGADVVAWDDNPDSVAKAAAAGIATADLRG
ADWHAFAAFVLSPGVPLTHPKPHWSVDLAHQAGVEIIGDVELFVRERRKHAPDCPFIAIT
GTNGKSTTTALIAHILRTSGRDTQLGGNIGTAVLTLDPPKAGRFYVVECSSYQIDLAPTL
DPTAGILLNLTPDHLDRHGTMQHYADIKERLVAGSGTAVVGVDDSLSSLIADRVERAGTK
VVRISRRHPLAEGIYAEGSALMRAQDGASSLFTDLAGIQTLRGGHNAQNAAAAIAACLAV
GISGKDIVDGLRSFPGLKHRMQPVAKKGEVVFVNDSKATNAEAAAPALSSYDRIYWIAGG
LPKEGGITSLAPFFPKIVKAYLIGEAAPSFAATLGEAVPYEISGTLEKAVAHAAADAARD
SQGPAAVMLSPACASFDQYKNFEVRGDAFVGHVAALEGVSMLI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcacctcattcaagggcaggaaggtcgcactcttcgggctaggcggctcg
ggcctcgctacggctcaggcactcgtttcgggcggcgcagatgtcgtggcgtgggacgac
aatcctgacagcgtcgccaaggctgccgcggccggaatagccaccgctgatttgcgcggc
gccgactggcatgccttcgccgccttcgtgctttcgcccggcgttccgctgacgcatccg
aagccgcactggagcgtcgatctcgcgcatcaggccggcgtcgagatcatcggggatgtg
gagctcttcgtgcgtgagcggcgcaaacacgcgcccgattgccccttcatcgccatcacc
ggcaccaacggcaagtccacgacgacggcgctgatcgcccatatcctcaggacaagcggg
cgcgacacgcagctcggcggcaatatcggcaccgcggtgctgacgctggacccgccgaaa
gcagggcgcttctatgtcgtcgaatgctcatcctaccagatcgaccttgcgccaacgctc
gacccgaccgccgggatactgctcaacctgacgccggatcacctggatcgccacggcacg
atgcagcactatgcggacatcaaggagcgtctggtggcggggagcggaacggcggtggtc
ggcgtcgacgacagcctctcgagcctgatcgccgaccgggtggagcgggcaggaacaaag
gtcgtgcgtatctcgcgccgccaccctcttgccgaaggcatctatgccgaaggctcggcg
ctgatgcgtgcgcaggacggggcatcgtcgctctttaccgatctcgccgggatccagacg
ctgcgcggagggcacaatgcccagaatgctgcggctgcgatcgccgcctgcctggcggtc
ggcatctccgggaaggatatcgtcgacggcctcaggagctttccgggcctcaagcaccgg
atgcagccggttgcgaaaaagggagaggtcgtcttcgtcaacgacagcaaggcgaccaat
gcagaggctgcagccccggcgctttcgagttacgaccgaatctactggatcgccggcggt
ctgccgaaggagggcggcatcacgtcactggcgccgttcttcccgaagatcgtcaaggcc
tatctgatcggagaggcggccccctccttcgccgcgacactcggcgaggcagtgccctac
gaaatctccgggacgttggaaaaggcggttgcgcacgcggcagcggatgcggcgcgggac
tcgcaaggtccggcggccgtgatgctttctccggcttgcgcaagcttcgaccagtacaag
aacttcgaggtgcgcggagatgccttcgtcggccatgtggcggcgctcgagggcgtgagc
atgctgatctga
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