Salvia miltiorrhiza (redroot sage): 131005344
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Entry
131005344 CDS
T09291
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131005344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smil03400
]
131005344
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
131005344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
131005344
NCBI-ProteinID:
XP_057788247
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All DBs
Position
1:69072506..69077970
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AA seq
934 aa
AA seq
DB search
MDAATDRNYLSPFLKRFPATSSSDLGSKRRKRIKADEGNGYSFSSYGSFPASWRFAFDKK
RQVLNESDPFTTKDLLNQLDSGKFGSVTKEIEDLIKRRRRVLDSFYALNPELSSTICLDV
QDKVASKPMEVAPDVIDLDDDKDDELERLVPESQLSHHAAPVVIIDSDDDNDATTGHLEV
DLKPPSLDLVIRDKPSGAGNLLMKDYVDRSSSGNLLMKDYVDRSSSGKSKNSQEAGVQMY
ITGEAEIGFTKDKGEYVGTDDLEESDELSDTNSDGLDNIWKEMTFALEGSKDAPGVVLHD
EYDVGEEEDCEHSFIFKDDIGDVCRICGVIKRGIETIIEYNFSKTTRTTRTYRYEGRTTR
EYEQTDIPIDGFKLSDGDPGVAEIHPHPRHRKEMKPHQTEGFNFLLSNLVSDNPGGCILA
HAPGSGKTFMIISFLQSFMAKYPAARPLVVLPRGILSIWKKEFLRWQVEEIPLLDFYSAK
AEGRAQQLEILKEWVSKRSILFLGYKQFSSIICDTGSGQVATDCINYLLKVPSILILDEG
HTPRNPETDILTSLERIETPRKVVLSGTLYQNHVQEVFNILNLVRPKFLKMDTSKAIRRR
ILSRAEIGGRMKHGRDNGFYDLIEHTLIKDENQSRKVTVIQDLREMTRRVLHYYKGDNLD
ELPGLVDFSVYLQLSPRQKADIKELKKVSFRKFSICAQGSAIYLHPILKTLAKNPLVKDR
VDETKMDAILENLNVKEGAKLNFYMNLLQLCESSGEKLLVFSQFLLPLKFLERITSKVKG
YSIGKEMFMITGDSDAGTRESSMEKFNSSSEARVFFGSIKACGEGISLVGASRIIILDVH
LNPSVTRQAIGRAFRPGQLKKVYTYRLIASDSPEQEDHATCFKKESISKLWFEWDESSGQ
QNFEMEEVDDISNCGDTFLETARLREDIVKVYRK
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgctaccgatagaaattatctcagtccctttttgaaaagatttccggcaact
tcctcaagcgatttgggctcaaaacgacgcaaacggataaaagcggatgaaggaaatggt
tatagtttttctagctatggtagctttcctgcatcatggcgcttcgcatttgacaagaaa
agacaagttctgaatgagtcggatcctttcaccacgaaggatttgttgaaccaattggat
tctggcaaatttggaagtgtgaccaaggagatagaagaccttatcaagcggaggaggcgg
gtgttggattccttctatgctctgaatcctgaactatcatcgacgatatgtctggatgtg
caagacaaagtggcgtcaaagccgatggaggtagctcctgatgtgattgaccttgatgat
gacaaggatgacgaactggaacggttggttccagaatcacagctttctcatcatgctgcc
ccagtggttatcattgattcagacgatgataatgatgctacaactggccatcttgaagtg
gatttgaagccaccttctcttgatcttgtcattagggataaaccttctggagctggaaat
cttctgatgaaggattatgtggaccggagttcttctggtaaccttctgatgaaggattat
gtggaccggagttcttctggtaaaagcaaaaattctcaagaagcgggtgtgcaaatgtat
attacaggcgaagctgaaattggattcacgaaggataaaggagagtatgtgggtactgat
gacctagaggaaagtgatgaattgtctgataccaattcagatggtctagataatatttgg
aaggagatgacctttgctctagagggttcaaaggatgctcctggagtagttctacatgat
gaatatgatgttggggaggaagaagactgcgaacattctttcatttttaaagatgacatt
ggtgatgtatgccgaatttgtggggttattaagagaggaattgaaaccatcattgaatat
aacttctcaaagaccacaaggactacaagaacttacagatatgaaggacgaaccactaga
gaatatgagcaaactgatattcccattgatggattcaaattatcagatggtgatcctggg
gttgctgaaattcatccacatccacgccacagaaaagagatgaaaccccatcaaactgag
ggatttaactttcttctgagcaacctagtgtcagataatcctggaggttgtatactggca
catgctcctggttccggtaagacattcatgattatcagtttccttcagagtttcatggca
aaatatccagctgcaagacctctagttgtgctgccaaggggcatcttgtcaatatggaaa
aaggaattcctccgatggcaagtcgaggagatacctttattggatttctactcagctaaa
gctgaaggccgcgcacagcaactcgaaattctgaaagaatgggtgagcaaaaggagcata
ctgtttttaggatacaaacagttctcctctattatctgcgacactggcagcgggcaagtt
gctactgattgcataaattatttgctgaaagtcccatcaattctcatcctagatgaaggt
cacactcctcggaacccagaaactgatatcttgacgtcactggagaggattgaaactcca
agaaaggtggttctttctgggacactctatcagaaccacgtgcaagaagttttcaacatc
ttaaatcttgtgcgcccaaagtttctgaagatggacacgtctaaagcaataaggaggcgt
atcttgagtagggcagagattggtggcaggatgaagcatggcagagacaatgggttctat
gatctaatagagcacaccctgatcaaagatgaaaaccaatcccggaaggtgactgtgata
caagatttacgggaaatgacaagaagggtcttgcattattacaagggggataacttagat
gaacttccggggcttgtagatttttcagtctatcttcagctcagccccagacaaaaagct
gacattaaagagttgaagaaagtgtcgtttaggaagttctcaatttgtgcacaaggaagt
gctatttatctgcacccaatattaaagactctcgccaagaatccccttgtaaaagataga
gttgatgagacgaaaatggatgctatcttggagaatttgaatgtgaaagaaggagcaaag
ctcaacttctatatgaatcttctgcagctctgtgaatcaagtggcgagaagctgctagtt
tttagccaatttctcctacccctgaaattcttggagaggataacgtctaaggtcaagggt
tacagcattggcaaggagatgttcatgatcacgggtgattcagatgctgggacacgggaa
tcttccatggagaaattcaacagttcatctgaagctcgagtgttctttggttcaatcaaa
gcctgtggtgaggggatatctcttgtgggggcttctcgcatcattatactggatgttcat
ctaaatccatccgtcactcgccaagcaatagggcgggcttttagacccggccaactgaag
aaagtctacacgtacagattgattgcttcggactcacctgaacaggaggatcacgctacc
tgcttcaagaaggaatccatttctaagttgtggtttgaatgggacgaaagcagcggtcag
caaaactttgagatggaggaagttgatgatatcagcaattgtggagacacttttttggaa
acggcacgattgagggaagacatagttaaagtctatagaaagtaa
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