Salvia miltiorrhiza (redroot sage): 131020491
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Entry
131020491 CDS
T09291
Name
(RefSeq) polyubiquitin-like
KO
K08770
ubiquitin C
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131020491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131020491
Ubiquitin system [BR:
smil04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
131020491
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
131020491
NCBI-ProteinID:
XP_057805325
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Position
4:complement(52669016..52671347)
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AA seq
458 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGRF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgttaagactctaactggcaagactataactcttgaggtcgagagttct
gatactattgacaatgtcaaggccaagattcaagataaggaagggattccaccggatcaa
caaaggctgatatttgctggaaaacaacttgaagatggcaggaccctagcagattacaat
atccaaaaggagtccacacttcaccttgtccttcgcctgcgtggtggaatgcaaatattt
gtgaaaaccctcaccggaaaaaccatcacccttgaagttgagagctcagacaccatcgac
aatgtgaaggccaaaattcaagataaggaaggaattcccccagatcaacaaaggctgatc
tttgctggaaaacaacttgaggatggcaggaccctagcagattacaatatccaaaaagag
tctacacttcaccttgtccttcgcctgcgtggtggaatgcaaatatttgtgaaaaccctc
accggaaaaaccattacccttgaagttgagagctctgataccatcgacaatgttaaggcc
aagattcaagacaaggaaggaattccacctgatcaacaaaggctgatctttgctggcaaa
caacttgaagatggtcgaacccttgctgattacaatattcagaaggagtccaccctccac
cttgttctcaggcttcgcggtgggatgcaaatttttgttaaaactcttactggcaagaca
attaccctggaagtcgaaagctcagacacaattgataatgtgaaagcaaaaattcaagac
aaggaggggattccaccagaccagcagagactgatctttgctggcaaacagcttgaggat
gggagaaccttggcagattacaatattcaaaaggaatcaacccttcatctggtgctgcgt
ttgaggggtggcatgcagatctttgtaaaaaccttgacaggaaagacaatcacattggag
gttgaaagttctgacacggttgacaatgtcaaggctaagattcaggataaggaaggcatt
cctccagaccagcagcgtctgatctttgctggcaagcagctagaagatgggcggacactt
gctgattataatattcagaaggagtcgactcttcatctagtcttgaggctgagaggtggg
atgcaaatctttgtcaagactttgacagggaagaccatcactttggaggtggagagttct
gatacaatcgataatgtgaaggccaagattcaggataaggaagggatcccaccggaccag
cagcgtctcatctttgcagggaagcagctggaagatggccgcacccttgcagattataac
atccagaaggaatctacccttcacctggtgctccgtctccgtggtggccgtttctga
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