Salvia miltiorrhiza (redroot sage): 131025236
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Entry
131025236 CDS
T09291
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131025236
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131025236
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
KH_GLD-3_3rd
Motif
Other DBs
NCBI-GeneID:
131025236
NCBI-ProteinID:
XP_057810886
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Position
5:complement(55698819..55702175)
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AA seq
442 aa
AA seq
DB search
MIAPMALTNYKLSIFLLCILLPLAAQAKIADFDEYLQKKAAESYEESLNSFDPNPEGVTD
DFNMMVGKALIGTKNATRRNLRNEDGCKATNPIDRCWRCDQNWDKNRKRLAECGAGFGYR
TTGGKEGRYYVVHDPSDDDMVNPRPGTLRHAVTQSEPLWIVFAHSMVIRLKQELIVSSHK
TIDGRGVQVHVAYGAGITLQFVQNVIIHNIWIHNIVPASGGTIRDAVDHVGLRTQSDGDA
ITVFSSSNVWLDHISLSKATDGLIDVIEGSTAITISNCKFNHHNDVMLLGANDLSSKDAI
MQVTVAFNRFGIGLIQRMPRARWGFVHVVNNDYSHWELYAIGGSAHPTIISQGNRFRASN
YRYTKEVTKRDYAQESEWMKWQWRSEGDLFTNGAYFRESGPPLKHTKNPLTGENLIKYKP
GSFVGRLTRSSGALRCRNGHYC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgatagctccaatggcgctcacaaattataaactatctatatttcttttgtgcatcttg
ctgccgctcgcagctcaggctaaaatcgccgatttcgacgaatatttgcaaaagaaggct
gcggaatcgtacgaggaatccttgaactcgttcgatcccaaccccgaaggcgtgaccgat
gatttcaacatgatggttggcaaggccttgatcggtaccaaaaacgcgacgaggagaaat
ctccgtaacgaggatgggtgcaaggcgaccaacccgatcgatcgttgttggcggtgcgac
cagaactgggacaagaacaggaagaggctggccgagtgcggcgccgggttcgggtaccgc
acaaccggcgggaaagaagggaggtactacgtggtccacgacccgtcggacgacgacatg
gtgaaccctagaccgggcaccctgcggcacgccgtgacccagagcgagccgctgtggatc
gtgttcgcccacagcatggtgatccggctgaagcaggagctgatcgtgagcagccacaag
accatcgacggccgcggcgtgcaggtccacgtggcctacggcgccggcatcacgctgcag
ttcgtgcagaacgtgatcatccacaacatctggatccacaacatcgtccccgccagcggc
ggcaccatcagggacgccgtcgaccacgtcgggctgcggacgcagagcgacggcgacgcc
atcaccgtcttcagctccagcaacgtctggctcgaccacatctccctttccaaggccacc
gacggcctcattgatgtcatcgagggctccaccgccatcaccatctccaactgcaaattc
aaccaccacaacgatgtgatgctcttgggggcaaatgacctgagctccaaagacgcgatc
atgcaagtgacggtggccttcaacagattcgggatcgggctcatccagcgcatgcccagg
gcacgatgggggttcgtccacgtcgtcaacaatgactactcccattgggaactctacgcc
atcggcggtagcgctcaccccaccattattagccagggcaaccgcttcagagcctccaac
taccgttacactaaagaggtgactaagagggactacgcccaagagagcgagtggatgaaa
tggcagtggcggtcggagggcgatctgttcacgaacggggcctacttccgagagtcgggc
ccaccgttgaaacacacgaagaacccgttgacgggggagaatttgatcaagtacaagccg
ggatcattcgtcgggagactcacgcgcagctccggtgcacttagatgccgcaatggtcac
tattgctag
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