Breviolum minutum: v1.2.029637.t3 Help Entry v1.2.029637.t3    CDS       T04349                                  Symbol symbB.v1.2.029637.t3 Name (OIST) -   KO K12812   ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13] Organism smin  Breviolum minutum Pathway smin03013   Nucleocytoplasmic transport smin03015   mRNA surveillance pathway smin03040   Spliceosome Brite KEGG Orthology (KO) [BR:smin00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     v1.2.029637.t3 (symbB.v1.2.029637.t3)   09122 Translation    03013 Nucleocytoplasmic transport     v1.2.029637.t3 (symbB.v1.2.029637.t3)    03015 mRNA surveillance pathway     v1.2.029637.t3 (symbB.v1.2.029637.t3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:smin03019]     v1.2.029637.t3 (symbB.v1.2.029637.t3)    03041 Spliceosome [BR:smin03041]     v1.2.029637.t3 (symbB.v1.2.029637.t3) Messenger RNA biogenesis [BR:smin03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      v1.2.029637.t3 (symbB.v1.2.029637.t3) Spliceosome [BR:smin03041]  Complex C   Other components    EJC/TREX     v1.2.029637.t3 (symbB.v1.2.029637.t3)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     v1.2.029637.t3 (symbB.v1.2.029637.t3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Helicase_C VPS9 DUF5601 Motif LinkDB All DBs AA seq 935 aa AA seqDB search MAGPDVDARFAEAGIEVDGEGEKGGTSEGVVPRESGYSYSHFVERFKHPSAQAVVNEIRD FVNEFPANLTRLQAARRIHHFLGQVTPKLLQAEAFSNEEDAEVASEGLEKFVVLKLFKLL FRHDPADIREDERADRALREAKAAKSGNSSSQSGQAMQAAQQVVAKFTLKQREAFEAAAL ELRKVEHFRAPRDKLSCFTNAIGLLENLVVEDVFQGNNVESTNESTWSKLLTALILKASP PNLYSNLEFTTSFRQPRMTPQEGKCLSDLANAFVMLVGNSRRLMSLDLSGPGSESPGREL PLWLMDAGVVIFVKSVQRAVALDKLLVECNFPSIAIHSGLQQEDRIARYKQFKEFQKRIM VSTDLFGRGIDIERVNIVINYDMPDESDSYLHRVGRAGRFGTKGLAITFVATEEDQEVLN KVQERFEWTLSPIRRRRRSWRPEMAPGGRREGGHGAWVKKAPAGGEKKDEETESQGFKGK EGKGKGRSKGERSRRDEDQEAKGKGRAKGKQKKDEGRESNSGEDEAEDGGNALLKMLKGN GQTTKRFSYTKAELLNIARLPSSNIKPPELDPIVDKDNKDSVLLIRIATGREKEEQEANG EDRRRNSTRQARAPEAEGAAHDTAVPAGVPAEAEGTAEDDDEEEKARAFEKWLGRNMPKL EAAKADLTAKAAAAGSATSGSTMTAAAPKWPPTASAMAAALANASGKSGSNYMSLLQQQA GASGSASGMTSAQLQAAAYMQAMTQMQVAAAAARNSYGSQWNAYNQYLNPYMSGAYSGYG MDPFAAAASQAAASNLTEAMQAKLGVLQQQARSMATAKAKAAAKATAKAKMQAKAMPKTP GPKVPGPKVSPSATPLAAPVSAPAVAGLLPKTSAPSSPELQAVPAKEATATATGSVGATA ATAPVAPAAPAAPGTAAPSGAGKGDEEDEAGCSQS NT seq 3032 nt NT seq  +upstreamnt  +downstreamnt tattgcatatgtttttccaaacatggaaaagaataaagcaagattttgtcacctccaaaa ccactcgccatggctggtcccgacgtggatgctagattcgctgaagcgggcattgaagtt gatggtgagggtgaaaagggtggaacatcagaaggtgttgtacctcgtgaatctgggtac agctattcacacttcgtggagaggttcaagcatccctcagcccaggctgttgtgaacgaa attcgggactttgtcaacgagtttccggccaacttgacgcgactgcaggcagccagaagg attcatcacttcttagggcaggtgacgcccaaactgctgcaggctgaagctttcagcaat gaggaagatgctgaggtggcgagtgagggacttgagaagttcgtggtgctcaagcttttt aagctgctgtttcgccacgatcccgcggacatccgcgaggatgaacgtgccgaccgagcc ttgcgcgaggccaaagcagccaaatctggaaatagctcaagtcaatccggtcaagcaatg caggctgcacagcaggtggtggcaaagtttacgttgaaacagcgggaagcctttgaagct gcagcactggaactgcgaaaagtggaacactttcgtgcaccaagagacaaattgagttgc ttcaccaatgccattggactccttgagaatttggtggtggaagatgttttccaaggaaac aatgtcgagtctaccaatgagtcgacctggagcaaattgttgaccgccttgattttgaag gcctctcctccaaacttgtattcgaatctggaatttactacctccttcagacaacccagg atgacacctcaagaagggaagtgcttatcagatttggccaatgcctttgtgatgttggtg ggcaacagtcggagattgatgtctttagatctctcaggcccaggtagtgagtctccgggc agagagcttcccttgtggttgatggatgctggtgtggtcatcttcgtgaagtctgttcag cgagctgttgcattagataagttgctggtggagtgcaatttcccatccattgcaatccat tccggacttcaacaggaggaccgaattgcaaggtataaacagttcaaggagttccagaag agaattatggtgtccacggatctttttggacgtggtatcgatattgaaagggtcaacatc gtcatcaactacgacatgccagatgaaagtgactcctacctgcaccgagttggacgcgca ggacgctttggaactaagggcctggcaattacctttgtggccacggaggaggaccaggag gtcttgaacaaggtccaggaacgtttcgagtggaccctttcccccatccgccggcgccgg cgctcctggcgaccagaaatggcgcctgggggacgacgtgaaggtggccatggcgcttgg gtgaagaaagctcctgcgggcggagagaagaaagatgaagaaacagaaagtcaaggcttc aagggaaaagaaggaaagggcaaaggacgctccaagggggagcgctcacggcgggacgag gaccaagaggccaagggcaaaggaagagccaaaggcaagcagaagaaggatgaaggaaga gaaagtaattcaggtgaagatgaagcagaggatggtggcaacgcgctcttgaagatgttg aagggcaacggccaaactaccaaaaggtttagctacaccaaggcggagctgttgaacatc gcacggctgccgtcctccaacatcaaaccacctgaattggatcccatagtcgacaaagac aacaaggactcggtcctgttgatccgcattgctacgggccgcgagaaggaggaacaagag gcgaatggcgaagacagacgacggaactccacacggcaggcacgtgcgccggaggctgaa ggcgctgcgcatgacaccgcagtgccggcgggagtgccggcggaggcagaaggaactgct gaagatgacgatgaagaggaaaaggctcgtgcctttgagaaatggttgggccgcaacatg cccaaactggaggcggctaaggcggaccttacagccaaggctgccgccgccggctctgcc acgagcggctcgacgatgacggctgcagcgccgaaatggccccccaccgccagtgcgatg gccgcagctttggccaatgcatcaggaaagagtggatccaattacatgtccttattgcag caacaagctggtgcaagtggcagtgcgtcaggaatgacctcagcacagttgcaagctgca gcatacatgcaagcaatgacgcaaatgcaggttgccgcggcagcagctagaaacagctac ggtagccagtggaatgcctacaatcagtacttgaatccttacatgtctggggcctatagt ggctatggcatggaccccttcgctgcggccgcttctcaagcagcagcctcaaacttgaca gaggccatgcaggcaaagttgggtgttctccaacaacaagcaagaagtatggccacagca aaggccaaggcggcagccaaggctacagcaaaggcgaagatgcaggccaaggccatgccc aaaacaccggggccgaaggtgccaggacccaaggtatcaccgtcagccacgcccttagca gcaccagtatcggcgccagctgtggctgggttgctacccaaaaccagcgctccaagctcc ccagagcttcaagccgtccctgcaaaggaagctacagctacagcaacgggaagcgtggga gctactgcagctactgcgcctgtcgccccagcagcacctgctgcaccgggaaccgctgca ccgtctggagctgggaagggggatgaagaagatgaagctggatgctcgcaaagctaagat gaaaaatggtgtgactgccctgaaaagccaactttcgagtagatgtgcgtattattcatt ttttgcacagcatatttgcagaatatcatatgcgcagaattcaacaagatgttctcaaca tttacgcggctcaaaaaatcagagaccagtgg

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