Sphingobacterium mizutaii: 4412673_02260
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Entry
4412673_02260 CDS
T05395
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
smiz
Sphingobacterium mizutaii
Pathway
smiz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
4412673_02260 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smiz01007
]
4412673_02260 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smiz03016
]
4412673_02260 (lysS)
Enzymes [BR:
smiz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
4412673_02260 (lysS)
Amino acid related enzymes [BR:
smiz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
4412673_02260 (lysS)
Transfer RNA biogenesis [BR:
smiz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
4412673_02260 (lysS)
Prokaryotic type
Other AARSs
4412673_02260 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF4332
AsnA
Motif
Other DBs
NCBI-ProteinID:
SNV51067
UniProt:
A0AAJ5C0H3
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All DBs
Position
1:2569396..2571114
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AA seq
572 aa
AA seq
DB search
MSIGLSEQEQQRRLNLKALIDLGIDPFPAEEFKVNATAEDILENYERDKINYKSISFAGR
IMSRRVMGSASFLELQDSTGRIQAYVKRDDICPDEDKTLYNTVFKKLLDIGDIIGITGFV
FTTQTGEISIHVQTLKVLTKALRPLPIVKEADGKTFDAFTDPEQRYRMRYVDLIVNSHNK
EIFVKRTKLFNAMREYFNNAGYMEVETPILQAIPGGAAARPFITHHNALDIPLYLRIANE
LYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTENLLEHC
AIAVNGTTEATFGEHQVDFKAPYPRVSMTDAIKQFTGFDITGKSEDEIRQAAKGMGIDVN
ETMGKGKLIDEIFGEKCEGNFIQPTFITDYPIEMSPLTKKHRDNPELTERFELMVCGKEI
ANAYSELNDPIDQRERFEHQLKLSEKGDDEAMFIDQDFLRSLEYGMPPTSGLGIGMDRLI
MFLTNNPSIQEVLFFPQMRPEKVAKVASTADYVEQGIPEAWVPVLQKMGFTTIELLKEAN
PNKVFNDLGGMRKKMKLDVAMPTKDEVLAWFE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcggattatctgaacaagaacaacaaagaaggctaaacctaaaagccttgatc
gacctaggcattgaccccttccccgctgaagagttcaaagtaaatgctacggctgaagac
attttagaaaactacgaaagagataagatcaactataagagcatcagttttgcgggccgt
atcatgagccgccgagtgatggggagtgcctcattcttggaacttcaagattcaaccgga
cgtatccaggcatacgtaaaacgtgatgacatctgccctgacgaagacaagaccttatat
aataccgttttcaaaaagttattggacatcggtgatatcatcggtatcacgggttttgtg
ttcaccacccaaacaggagaaatcagtatccacgttcaaaccttaaaggttcttaccaaa
gctttgagacctcttcctattgttaaggaagcagatggaaagacttttgatgcctttacc
gatccagaacaacgctatagaatgcgttatgtggacctgatcgtaaactcccacaataaa
gagatttttgttaagcgtacgaagctgttcaacgccatgcgtgaatacttcaacaacgct
ggatatatggaagtagaaactccaatcctacaggcaattcctggtggagcggctgcacgt
ccgtttattacccatcacaatgcattggatatcccattgtatttgcgtatcgccaatgag
ctttatctgaaaagattgatcgtcggtggatttgatggcgtctatgagttctccaaaaac
ttcagaaatgaaggtatggacagaacgcataaccctgagtttaccgcaatggaaatctat
gtagcctataaagactacaactggatgatggatttcacagagaatcttttagagcactgt
gcaattgcagtaaacggaacaacagaagctacttttggagagcatcaggttgatttcaaa
gcgccttaccctagggtgagcatgactgatgccatcaaacaattcactggttttgatatc
acaggaaaatcagaggatgaaattcgtcaggctgcaaaaggtatgggaatcgacgtgaat
gaaactatgggtaaaggaaaattgatcgatgaaatcttcggcgagaaatgtgaaggaaac
tttatccaacctacctttatcacggactaccctatcgaaatgtctccattgaccaaaaaa
catagagacaatccagaattgacagaacgttttgaactgatggtctgcggtaaggaaatt
gcaaacgcatattctgagcttaacgatcctatcgatcaaagagagcgtttcgagcatcaa
ttaaaactttctgagaaaggtgatgacgaagcaatgttcattgaccaagatttcttgcgt
tcattggaatacggtatgcctcctacctcaggactaggaatcggtatggacagattaatc
atgttcctgaccaacaacccttcgatccaggaagtattgttcttccctcagatgcgtcca
gaaaaagttgcaaaagttgcttcaacagctgattatgtagaacaaggaattcctgaagca
tgggtacctgttcttcaaaaaatgggattcacgaccatagagcttctaaaagaagctaac
ccaaacaaagttttcaatgacttaggcggaatgcgcaagaaaatgaaactagatgttgcc
atgcctactaaagacgaagtcttggcctggttcgaataa
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