Schistosoma mansoni: Smp_016780
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Entry
Smp_016780 CDS
T01095
Name
(RefSeq) putative tubulin alpha chain
KO
K07374
tubulin alpha
Organism
smm
Schistosoma mansoni
Pathway
smm04145
Phagosome
smm04517
IgSF CAM signaling
smm04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
Smp_016780
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
Smp_016780
09142 Cell motility
04814 Motor proteins
Smp_016780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_016780
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_016780
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smm04812
]
Smp_016780
04147 Exosome [BR:
smm04147
]
Smp_016780
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Smp_016780
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
Smp_016780
Cytoskeleton proteins [BR:
smm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
Smp_016780
Exosome [BR:
smm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Smp_016780
Exosomal proteins of other body fluids (saliva and urine)
Smp_016780
Exosomal proteins of colorectal cancer cells
Smp_016780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
8349877
NCBI-ProteinID:
XP_018653378
UniProt:
G4VKY4
LinkDB
All DBs
Position
6:17167149..17168681
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISVHVGQAGVQMGNACWELYCLEHGIQADGRMPSDKTVGGGDDSFNTFFSETGSGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVEYGKKSKLEFSVYPAPQIATA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYSPVISAEKAFHEQFSVAEITNACFEPAN
QMVKCDPRRGKYMSCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDYKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEGEGDGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagggaatgtattagtgtacatgttggtcaagctggagttcaaatgggcaatgcttgt
tgggaattgtattgtttggaacatggaattcaagctgatgggcgaatgccgagtgataag
actgttgggggtggagacgattcctttaatactttttttagtgaaactggttcgggaaaa
catgttccaagagcagtatttgtagatttagaacccactgtagtagatgaggttcggact
ggtacttatcgtcaactttttcatcctgagcaattgattactggtaaagaagatgctgca
aacaattatgcacgtggtcactacacaattgggaaagagattgttgatttggtgttagat
aggattcgtaaacttgccgatcagtgtaccggtcttcaggggtttctgatatttcattca
tttggtggaggcactggttcaggtttcacatctttgttgatggaacgactgagtgttgag
tatggaaagaaatcgaagcttgaattttctgtttaccctgctccacaaattgcaactgct
gttgttgaaccttacaattctatcttaacaacgcatacaactttggaacattcggattgt
gcatttatggttgataatgaagcaatatacgacatatgtcgtcgtaatttagatattgaa
cgtccaacttacacgaacttaaatcgtttaattggtcaaatagtgagttctattacagct
tctctgcgttttgatggagctttgaatgttgatctcactgagtttcaaacgaatttggtc
ccttatccacgtatccacttcccattggcaacatattcacctgtgatttcagctgaaaaa
gcatttcatgaacagtttagtgttgctgagattactaatgcctgctttgagccagcgaat
caaatggtaaaatgtgatcctcgtcgtggtaaatacatgtcctgttgcatgttgtaccgt
ggtgatgttgttccaaaggatgtgaatgcagccattgctaccattaagacaaaacggaca
attcaatttgttgattggtgccctactggctttaaagttgggatcaactaccaacctcct
acagtggttccaggtggtgatttagcaaaggtacaacgtgctgtttgtatgctgagtaat
acaacagccattgcagaagcctgggcccgtttagattacaaatttgacttgatgtatgca
aaacgtgcattcgtccattggtatgtcggtgaagggatggaagaaggcgagtttagtgag
gctcgtgaagatcttgcagctttagagaaagattatgaagaagttggagttgatagtgtt
gagggtgaaggtgaaggtgatggcgaagaatactga
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