Schistosoma mansoni: Smp_176270
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Entry
Smp_176270 CDS
T01095
Name
(RefSeq) putative syntaxin
KO
K08490
syntaxin 5
Organism
smm
Schistosoma mansoni
Pathway
smm04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
Smp_176270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smm04131
]
Smp_176270
Membrane trafficking [BR:
smm04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
Smp_176270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin
DUF16
DUF6746
TSC22
TRPM_tetra
Vac_Fusion
Motif
Other DBs
NCBI-GeneID:
8341937
NCBI-ProteinID:
XP_018653343
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All DBs
Position
6:complement(15647067..15683108)
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AA seq
403 aa
AA seq
DB search
MVMKVSARKNGNKKCNPSVPGSSLGLRMCSAVDRTSDFIRSVQLSRSKLNEFKRQDELSS
NSFGNHVMDHTSLGMPKANSNDSVFENNISHKINVPNGSMKNQDHSNKKSTALSQRSQFM
KAASVISQDLTNTFSKLEQLNALARKQTLFDDHSSEIQHLTYVIKESIANLNNRIANLQE
ISKSQVSVGKQQSTHSRSVLMVLQTHLAKMSDQFRGVLEYRSENIKSQNARKSKYSSLDD
KYESSETMSSVKPPHVVIPEALLSEKQGNDGLDGLGNLGPSTLPINSNLGLAQKYINPDQ
TDSYLLSRSDAMQSIEHTIVELGQIFQQLATMVHEQDESIRRIDANVDDATISIEAGHSE
LIRYFNSISSSRWLMIKVFFVLIIFFVIFVKDKSDMDNNDTID
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggttatgaaagtgtctgccaggaagaatggcaataaaaaatgtaatccatcagtacct
gggagctcattaggattaaggatgtgttcagcagttgatcgtacctccgattttatacgt
tccgttcaacttagtcgttctaaattgaatgaatttaagcgtcaagatgaattatcttct
aattcatttggaaatcacgtaatggatcacacatctttggggatgcctaaagctaattcc
aatgattccgtatttgaaaacaatatttcacacaaaattaatgttccaaatggatctatg
aagaatcaagatcactctaataaaaaatctaccgctcttagtcaacgttcacagtttatg
aaagcggcctcagttattagtcaagatctaacgaatacattttctaaattggaacagttg
aatgcattagctcgtaaacaaacgctattcgatgatcatagttcggaaattcaacacttg
acatatgttataaaagagtctatagcgaatctaaacaataggattgctaatttacaagaa
atttcgaaatctcaggtatctgttgggaaacaacaatctacacactctcgttcagtacta
atggttttgcaaacgcatctcgctaaaatgtctgatcaatttcgaggagtgctagaatac
cgttctgagaatataaagtcacagaatgctcgtaaaagcaaatatagttcattggatgac
aagtatgaatcatctgaaacaatgtcatctgtaaagcctccacatgttgttattccagaa
gctttactcagtgaaaaacaaggaaatgatggattggatggtttaggaaatttaggacca
tctactctacctataaactcaaatttaggacttgctcaaaaatatattaatcctgatcaa
actgattcctacttattatctcgatcagatgcaatgcaaagtattgagcatacaattgtt
gaactggggcaaatttttcaacaattagctactatggttcatgaacaagatgaatcaatt
cgtcgtatcgatgctaatgttgatgatgcaacaatttccatcgaagctggtcattcagaa
ttaattcgttattttaattcaattagttcaagtcgatggcttatgattaaagtatttttt
gttttaattatattttttgtaatatttgttaaagacaaatcagatatggataataatgat
actattgattaa
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