Selaginella moellendorffii: SELMODRAFT_120030
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Entry
SELMODRAFT_120030 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00040
Pentose and glucuronate interconversions
smo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SELMODRAFT_120030
Enzymes [BR:
smo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SELMODRAFT_120030
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9645067
NCBI-ProteinID:
XP_002984207
JGI:
120030
UniProt:
D8SLT6
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
PYHGVDATLRGLAGAAEGFGAASIGGLEGDTYPVTNLLDDGPGSLRYAAARDEPLWVVFN
VSGTISLASPLRVTSHKTIDGRGQRIKITGNGLLLQSCEHVIVNNLEFERGRGDAITIVA
DAKDVWIDRCTLSDYNDGLIDITRRSTRVTVSRCHFYQHKKTMLISANPRHVGDRNIKVT
IHHCYFDQTQERHPRVRFAKVHLYNIYFREWGVYGVRASVEAQIVSEHNVYEAGTSKRAF
DYFIEKAPDSDIAVAGSISSDGDVFLNGAEGPANSTAFLPEDYYSMNPKVHPAGKQLVRV
IRETAGWQNIPLPGSSSVKVSSISFSKCLDQFPFDFRKATRVLMSTTVVITKRLTAQPEA
KFRSRKSLPDHGDGMVELTNSGVGSFTRAA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
ccttaccatggtgtcgatgctacgcttcggggactggcaggagcagcggaaggatttggt
gccgcttcgatcggtggcctcgaaggcgatacttatcccgtcaccaatctccttgatgac
ggtcctggaagtcttcgttatgctgctgctcgagacgagccactctgggttgtgtttaac
gtttcaggaacaatttctctagcgtccccgctcagagtcacgtcccacaagacgatcgat
ggccgcggccaacggatcaaaatcactggaaacggtctgctcctgcagagctgcgagcat
gtcatcgtaaacaatctcgagtttgagcgaggccgcggcgatgccatcacaattgtcgct
gacgccaaagacgtgtggatcgatcgctgcacgctctcggactacaatgacggcctcatt
gacatcacgagacggagcactcgcgtgacggtttccagatgtcacttttatcagcacaaa
aaaacgatgcttatcagtgccaatcctcgtcacgtcggggatagaaacattaaagttaca
atccaccattgttactttgatcagacgcaagaacgacatcctcgagtgagattcgcgaaa
gtccatctttacaacatctactttcgggagtggggggtgtatggtgttcgcgctagcgtg
gaagctcagattgtctcggagcacaacgtttatgaggccggaaccagcaagcgtgctttc
gactattttattgaaaaggctcccgatagtgatatagccgttgctggcagcatcagctct
gatggagatgtgtttctcaatggagccgaaggcccagcaaactccactgccttccttcca
gaagattactactcgatgaatcccaaagtgcatccggcaggcaagcagcttgtcagagtg
atcagggagacggctgggtggcaaaacataccgcttcccggcagctcgtccgtcaaggta
agttcgatttctttttctaagtgcctcgatcaattcccgtttgatttcagaaaagcgact
cgcgttttgatgagcaccaccgttgtcatcaccaagcgtcttactgcgcaaccagaagct
aaattccgaagcaggaaaagcctgccggatcatggggacggcatggtggagctcacgaac
tctggagtcggttccttcacgcgagcagcctga
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