Selaginella moellendorffii: SELMODRAFT_123922
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Entry
SELMODRAFT_123922 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K16474
intraflagellar transport protein 88
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smo03037
]
SELMODRAFT_123922
Cilium and associated proteins [BR:
smo03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
SELMODRAFT_123922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_14
TPR_19
TPR_12
TPR_8
TPR_6
TPR_7
TPR_11
TPR_9
TPR_17
ANAPC3
TPR_10
ARM_TT21_5th
TPR-S
TPR_CcmH_CycH
TPR_Slam
HAT_PRP39_C
HemY_N
NTS_TR130
ANKH
TPR_21
Motif
Other DBs
NCBI-GeneID:
9649224
NCBI-ProteinID:
XP_002986277
JGI:
123922
UniProt:
D8SSG2
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
RPMTAVRAAGYTSRGTKFDPLNQGARLTNAQKRDELNPEYQVRELESQVNQMLEESATAS
FLGQYATALEKAKEAGKRERKLCKHREQTGLADQVNTELTFAVCFNLGYQYEMNRLHSEA
LNTYSQIVKSKQFPQGGRLRVNMGNIYYEQEKYALAVKMYRMALDQTPNSYKDTRYKIMR
NIGISLMRTGHYQDAVQSFESLIDITVDHHAAYNLLVSHYVLGNCSKMRSCFTKMLLVKH
YDPERDDDIEPDHTAVFRVGPFPLDELRQELHARQNQANRLILTSARIIAPVVGNSLVEG
YDWVIELLQDQQYVTLAHEMEMDKALQHLHQRDFQQAIALLKEFERKERDLQARAATNLS
FLYFLEGDLANAEKHAELAVLNNRFNACALVNQGNCYFMRGDPERAKQVYKGAADVDPDC
VEALYNLGLAYKKLNSFEEALSVFKKISYVLPNNTEVLFQIGQVSDVMGNSRQAIKWLEL
LVSKVMHDAGLLAMLGNLYVRCEDDAKALHYFSESHRVCPTDVVVTAWLGSFYLQNELYE
KAMPFFQLASRIHPDEVVKWKLKVALCLRRTGSFSKALHKYKQILNAHPDNAECLHCLVH
LCTSLGRKMEVQAYESKLWKVDQDHQRQTGSSMACFGQCPRRVGYDSVKSSGKARDEDWE
LTDDLLPI
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
agacccatgacggctgtaagggcagctggctatacctccagaggtaccaagttcgatcct
ttgaatcaaggtgcacgtttaacaaacgcgcagaaaagggacgaactcaatcctgaatat
caggttcgcgagctggagagtcaggtcaatcagatgctggaggaaagtgccactgccagc
tttctgggtcaatatgccactgctctggagaaagctaaagaagctggaaaacgcgaaagg
aagctctgcaaacatcgagagcagacgggcttggctgatcaagtgaataccgagctgact
ttcgctgtctgttttaatctaggatatcaatatgaaatgaaccgtttacactcggaagcg
ttgaatacctattcacaaatcgtgaagagcaagcaatttccacagggtggaaggttaaga
gtaaatatggggaacatttactatgaacaagagaaatatgcacttgcagtaaaaatgtat
cgcatggcccttgatcagactcccaattcgtacaaagatacgcgatacaagatcatgcgc
aatattggcatctctttgatgcgtactggccactaccaggatgctgttcagtcatttgaa
tcattgatagacatcacggtcgaccatcacgcggcttacaatcttctagtttcccattat
gttttgggaaattgttccaaaatgagaagctgctttacaaaaatgctcttagtgaaacac
tatgatccggagcgtgacgatgacattgagcccgatcatacggccgtgtttcgggtgggt
ccgtttccactggacgagttgcggcaggagctacatgcaagacaaaatcaggcaaacagg
ctcatactaacatctgcgagaattattgctcctgttgttggaaattctttggtagagggt
tatgattgggtcatcgagttgctacaagaccagcaatatgtgacccttgcacacgaaatg
gaaatggataaagcccttcaacacctacatcaaagagactttcaacaagccatagcattg
ctaaaagaattcgaacgaaaggaaagagatttgcaagcacgagcagcaacaaatctgtct
ttcttatatttcttggagggtgatctggcgaacgcggagaaacacgcggagcttgctgtt
ttaaacaatcggttcaacgcttgcgccctagtcaaccaaggaaactgctactttatgagg
ggcgatcctgagcgcgcaaagcaagtctacaaaggcgctgcagacgtggaccctgattgc
gtggaggcactttataacctgggccttgcgtataagaaactaaattcttttgaggaagca
ttgagcgtattcaagaaaataagttacgttcttccgaataataccgaagtattgtttcag
attggacaagtgagtgacgttatgggaaactctcgacaagcaataaagtggctagagctc
ttggtctcgaaagtgatgcatgatgcaggccttttagctatgctgggaaacctctacgtg
cgctgtgaagatgatgcaaaggctcttcactacttcagcgagtcgcacagagtgtgtcca
acggatgtggttgtcactgcgtggttggggtctttttatctgcagaacgagttgtacgag
aaagcaatgcctttcttccaactagcgtcacgcattcatcctgacgaggtagtgaagtgg
aagctaaaggtggcgctgtgcttacgacgaacgggttcattttcaaaggcacttcacaaa
tacaagcaaattcttaacgcacacccagacaatgcagagtgcttgcactgtttggtgcac
ctttgcacaagtcttggcaggaaaatggaagtccaggcttatgagagcaaactgtggaag
gtggatcaggatcatcagaggcagacgggcagcagcatggcttgttttgggcaatgccca
cgacgagttgggtacgacagtgtcaagtcctctggaaaagccagggacgaagattgggag
cttacggatgacttactcccgatctga
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integrated database retrieval system