Selaginella moellendorffii: SELMODRAFT_126964
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Entry
SELMODRAFT_126964 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03348
anaphase-promoting complex subunit 1
Organism
smo
Selaginella moellendorffii
Pathway
smo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SELMODRAFT_126964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_126964
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_126964
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
APC/C
Other subunits
SELMODRAFT_126964
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
SELMODRAFT_126964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANAPC1
Apc1_MidN
APC1_C
APC1_3rd
PC_rep
Motif
Other DBs
NCBI-GeneID:
9652004
NCBI-ProteinID:
XP_002987935
JGI:
126964
UniProt:
D8SX20
LinkDB
All DBs
Position
Unknown
AA seq
1600 aa
AA seq
DB search
MGRAFCVLGEFEPFGRRAEAAVGAAAGSNDSYFLFDPGVARARGDGVEQAVVSGCGNHYE
EEIFIRDNCCTQHHIHTTIDRFFFFFQACWCSMESTPEPLLCILHSNSLSTYTPSGEFNS
VPFSSAMSSMWPMPSGLLLQRAAEAVPYSVSPAAETSGSVYFTLQHNLEEPEALCVEVSG
RIQSLVDSDEQIIWTSGRLPYAVSYHSGRKQHTVWEVKSTNSRLEQGRTLERSNSMYLLQ
CWREQGSNPQAAQVFIATDDDREPLVCFVIKDAKRLFAIKLSRAPEPAADVAWSISAVSA
VPIVASQPTLRRGLPRLDMLVLAPDGNVFLYTGRYPLCTYVLPASVLQQTGQHRVEKLLD
SVNTRANVLTSSGKVCNRVFFLSLKLVTLIYRCIVELIPSSGITRSCLLALSEGLRPSFY
RFVLGSLMEFKPGQLNKTDSSFDKDWSAFSGIMMQWTGERRSDSYKHRSLSSWEFLLQSN
RHRNGSHPYPSRRYELCPTHNSKNERSGYSSMLLEVLETLHLVYEDFKLDVLRWGEMWKL
GVLLNSIAVAVEEYDYADHYVRDFPTVVTSRVMSNVSSRSSGLIINHFTWIENLLRKKHA
TSRLPALLTKEDGSLDWSRKVLGFFEVLLGSGNRDKLLSGICIKFAPGTATNAEQMTVLA
MVGERFGLSHLDRLPCGLSLPLRHALNSCRESPPADWPPDAYILLGREDLAYMSASRKSG
AKDVTMAAQYMLHLRPTLPFTEREPIPSDTPPMEGQASDGMEHIFTPSATLRFGSDLRLN
EVRRVLCSSKPVAVRTANAPDVSDPDLVAQQQALPIPKLVLAGRLPSQHDATVNLDVNAG
NVSEFTSWPEFHNGVAAGLRLAPGQAKITRTWIVYNKPDEPSYEHAGFLMSLGLHKHLAV
LAATDVFRYLAQEHDPTTVGILLGMAAAHRGTMDPAMSKMLYLHIPARHPPSFPELELSS
LLQSAALMAVGLLYQGSAHRLTTEILLAEIGRKPGSDSSLDREGYALAAGVALGLVTLGK
WLCCVWKHGKTFLQAEERMLGVLPTCKLKIDCAIICVMEGSIVNLDVTAPGATLALALMF
MKTNDHVVAARLAIPDTHFALEYVRPDFILLRLIARSLILWDSVQATEEWIQSQVPDIIR
QAVVQAKGSDAGADVTPDLDMEALTQAHVNILAGACLSIGLRYAGTANAEAQTLLQHYAL
YFMKEKSQAASGTSPNDRRVDRGTLETCLDVAVLSLSVVMAGTGHLETLRLLRYLRQRND
TDIVYGNHMAVSLAIGFLFLGGGSLTFSTSNGAVAALLISLYPRFPTSPNDHRCHLQAFR
HLYVLATEARCVQTMDVDTGLLVYAPLEMTLHETSLHCETTFSRVSPCILPERSALKRVR
VCGPRYWSQDMQFLLSDDPIGSRSLLSRALQRSKVDELVGAFSSDPSLLAFAHLFCSSRL
NSVLVSRSKSRPLLFQVSLAYCGAAGHDPALQGPSLIQRTFLVSLAKRMDDILTHWKCRR
FEDREQLGPPPELVSYLSSHTWPRESASSEDIQRLMFACYVSWEGVPQPALVTKALLEIQ
QSIPDWSKQDRNSLLPMLASLLPGTPPRTLLQITYCLPLL
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggggagggcattttgtgtcctgggcgagtttgagccctttggccggcgagcggaggcg
gcagtcggcgcagcagctggatcgaatgacagctacttcttgttcgatcctggcgtcgcc
agagcgcgcggggatggggtggaacaggcggtcgtctctggctgcggcaatcattacgag
gaggaaatcttcatccgcgacaattgttgtacacaacaccacatacacaccacaatcgat
cgttttttcttcttcttccaggcatgctggtgtagcatggagtccacaccggaacccctt
ctttgcatcttgcactcgaactcactgtcgacatacaccccttccggtgaattcaactcg
gtcccgttttcctctgcaatgtcttctatgtggccaatgccttccggtctacttttgcag
cgtgcggctgaagctgtgccatactctgtttccccggctgccgaaaccagtggttctgtc
tacttcaccttgcaacacaacttggaagagcctgaggcattatgtgttgaagtttcgggg
agaattcagtcgctggtggactcagatgagcaaataatctggactagtggacgtttacca
tatgctgtgtcgtatcactcaggtcgcaaacagcacactgtgtgggaagtcaaatccacc
aattctcgtcttgaacaaggtcggacactagagcgatccaactctatgtacctgctgcaa
tgttggcgggagcaaggcagcaatcctcaagcagcgcaggtgttcatcgccacagatgat
gatagggagcctttggtttgctttgttatcaaggatgccaaaagactctttgcaataaaa
ctttctcgggcaccagaacccgcagcggatgtcgcatggagtatttcggcagtctctgcc
gttccaatcgttgccagtcaaccaacattgagaaggggtctgccgcgtttagatatgctg
gttctggcaccagacgggaacgtctttctgtataccgggcggtatccattgtgtacatac
gtcctacccgcctcagtcctccagcaaacaggacaacatcgcgtcgagaagcttcttgat
tctgtcaacacccgtgccaacgttctgacttcttctggcaaggtttgtaaccgtgtcttc
tttctgtccctcaaattagtgactttgatttatcgatgcattgtggagttaatcccatca
tcaggaatcacgaggtcttgtttgcttgcgctttcagaaggattaaggccttcgttttac
cggttcgttttgggatccttgatggaattcaagcccggccaactaaacaaaacggatagc
tcttttgacaaagactggtctgccttttccgggatcatgatgcagtggacgggtgagagg
agatcggattcgtataagcatcgctctctttccagttgggagtttttattgcaaagcaac
aggcacagaaatggatcacatccatatccaagtcgaaggtacgagctatgtccaactcac
aacagcaagaatgaacgatcaggctactcctcgatgctgctagaggttttagagacgctt
cacttggtttatgaagattttaagctggatgtcttgcgatggggggaaatgtggaaactg
ggagttcttctcaacagtatcgcggtggcagttgaagagtacgactatgctgatcattat
gttcgagactttccaacggtagtaacatcacgggtgatgtcaaacgtatcttccagatca
agcggtctcatcattaatcattttacctggattgagaaccttctgcgaaagaaacatgct
accagtcgcttgccggcactccttactaaagaagacggttctcttgactggtcacggaaa
gtattgggattcttcgaagttcttttaggatctgggaaccgtgacaagcttttatctggc
atctgcataaagtttgcaccaggaactgcaacaaatgcagagcagatgacggtgttggcc
atggttggagaacgctttggattatctcatctggatcggctgccttgtggtctttcgctc
ccactacgccatgctcttaacagttgtcgggaatctccaccagcagattggccgcctgat
gcctatatacttctgggccgtgaggatttagcctacatgtctgcaagtcgtaagtcgggt
gcgaaagacgtgactatggcagcacaatacatgttgcatcttcgtccaactcttcccttt
actgaacgcgagccaattccatcagatacacctccaatggagggacaagctagtgacggg
atggaacatattttcaccccatcggctacattgagatttggttctgacttacgattgaat
gaggttcgacgggttctttgttcatcaaagcctgttgctgtgaggaccgccaatgcacct
gacgtgagtgatccggatcttgttgctcaacagcaggcccttccaattcctaaactggtt
ttagctggacgtcttccttcacagcacgacgcaactgtcaatctggacgtaaatgcgggg
aacgtctccgagttcacttcgtggccagagtttcataatggtgttgctgctgggctacgg
ctggcacccggtcaggctaaaattactcgtacatggatcgtatacaacaaaccggatgag
cctagctacgagcatgctggatttctcatgtccctggggcttcataagcacttggcagtc
ttagctgctactgatgtgttcagatatttggcccaggagcatgaccccacaactgttggt
attcttcttggaatggcagctgcacatagagggaccatggatccagccatgtcaaagatg
ctttatcttcacattcctgcgcgccacccaccatcgtttccagagctggaattatcttct
ttgctacagtcggcggcacttatggcagtaggcctgctttatcaaggatcagcccatcgc
ctcacgacagaaattttactggcggagattggccgtaaacctggtagtgacagttcttta
gaccgtgagggctatgcacttgctgctggtgtggcccttggtctagttactttaggtaaa
tggctatgctgtgtttggaaacatggtaaaactttcctgcaggcagaggaaaggatgctt
ggggtcttgccgacttgcaaattgaagatcgattgcgccattatatgtgtcatggaaggg
tccattgtaaatttggacgtgactgcacccggggcaacgcttgctcttgctctcatgttc
atgaagacaaacgatcacgttgtagctgcaagacttgccatacccgatacacattttgca
ctcgagtatgtcagaccagattttatccttcttcggctgattgctcgtagcttaatttta
tgggacagtgtgcaagccacagaggagtggattcagtctcaagtgcccgatattatacgc
caggctgtcgtccaggccaagggtagcgacgccggtgcagacgtcactcctgatttagac
atggaagcacttacccaagcgcacgtaaatattcttgctggggcgtgcctgtctattggt
ctccgctatgctggtacggctaatgctgaagcacaaacgctgctacagcactacgctttg
tatttcatgaaagagaaatctcaagctgcttctgggacctccccaaacgaccgacgtgta
gacagagggacgctggaaacatgtctcgatgtggctgttctgtctttgagtgtggttatg
gctggtaccggacatctggagaccctcaggcttttgcgctaccttcgacaaagaaacgac
acagatattgtctatgggaaccatatggcagtaagtttggcaataggatttttgtttctt
ggaggaggctcccttacattctcaaccagcaatggcgctgtcgctgcactactcatatcc
ttgtatcccagatttccaacctcgcctaatgatcatcgctgtcatcttcaagcgtttcgt
cacctgtacgttcttgcgacggaagcgcgatgtgtgcagacaatggatgtggataccggc
ttattagtatatgcaccccttgagatgacgctacatgagacgagcttgcactgcgagacc
acattcagcagagtctctccttgcatacttcccgaacgctctgctttgaagcgagttcgc
gtttgcggaccgcggtattggtctcaagatatgcaatttttgctttcagatgatcccatt
ggctctcgttctcttctttcgcgagctttacagcggtcgaaggttgatgagcttgtgggt
gctttctcttctgatccaagtttactagcctttgcgcatcttttctgcagtagcaggtta
aactctgtcttagtctcgcgatctaaatctcgtcctttgctcttccaggtgtctttagca
tactgcggggcagcaggtcatgaccctgcgttacaagggccatcactcatacagcgaacg
tttctcgtgtcactggcgaagcggatggacgatatcttaacccattggaaatgtaggcga
ttcgaggaccgtgagcaacttggaccgccacctgagttggtttcttacttgagttcacac
acctggcccagggagtcagcgagcagcgaggacatacagaggctcatgtttgcttgttac
gttagctgggagggagttccccagccagctctggtgaccaaagcgttgctagagatacag
caatccataccggattggtccaagcaagacagaaactccttgcttccaatgctggcatct
ttgctacctggtacacctccgagaacattacttcaaatcacttattgtctgccgttgctg
taa
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