Selaginella moellendorffii: SELMODRAFT_13605
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Entry
SELMODRAFT_13605 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00040
Pentose and glucuronate interconversions
smo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SELMODRAFT_13605
Enzymes [BR:
smo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SELMODRAFT_13605
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9646171
NCBI-ProteinID:
XP_002976074
JGI:
13605
UniProt:
D8RXV0
LinkDB
All DBs
Position
Unknown
AA seq
232 aa
AA seq
DB search
KKLPKCAIGYAGSVTGGARGTMYTVTSSDDNPSRPQRGTFRYGAQLANGRNGGVWITFAR
SMTIVLRDMVWIRSSTTVDGRGVNVVFTNKCFVLGGVSNVILHNFEISRVPQTDTIHIFG
SSRGVWVDHITSSDAKLGLVSVVQGSTDVTISNCYLSNKNFNMLLGASDADLQDRNMRVT
IFRNWFRDSMQRMPHCRLGYCHVVNNLYTNWGYYAIGGRANAQILSESNAFI
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
aagaagttaccaaagtgtgctatcggctatgctgggagtgtgactgggggagccaggggt
accatgtacacggtcacaagctccgacgacaatccatctcggccacagcgcggcaccttt
cgttatggagctcagctggccaacgggagaaacggaggggtttggatcacctttgctcgg
agcatgactatagtcctccgcgacatggtgtggatccggagctccaccacggttgatgga
cgtggagtgaacgtcgtctttaccaacaaatgcttcgttctcggcggtgtcagcaacgtt
atccttcacaacttcgagatctctcgagtgccacagacggatacaatccacatctttgga
tcctcgaggggcgtttgggtggatcacatcacgtcctcggacgcgaagctcggcctcgtc
tcggttgtccagggatcgactgacgtgaccatctcaaactgctatctttccaacaagaac
ttcaacatgttgctcggtgcctcggatgcggacttgcaggatcgaaacatgcgcgtgacc
atcttccggaactggtttagagactcgatgcaaaggatgcctcactgcaggttgggatac
tgtcacgttgtcaacaatctctacacgaactggggatactacgccatcggaggaagagca
aacgcacagatcctgtccgagagcaacgcattcatt
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