Selaginella moellendorffii: SELMODRAFT_171139
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Entry
SELMODRAFT_171139 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
smo
Selaginella moellendorffii
Pathway
smo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SELMODRAFT_171139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_171139
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
SELMODRAFT_171139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
9646255
NCBI-ProteinID:
XP_002969817
JGI:
171139
UniProt:
D8RFY2
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MASCPARSAPIHPIDKASIHRICSGQVILDLATAVKELVENSLDAGATSIEVKLKEHGGD
AIEVSDNGSGVSSDNYQVFFLSLDLFGLTLKYHTSKLSDFSDLQSLTSFGFRGEALSSLC
SLADVSIHTRTKEDETGTRISYNRAGLIVSKETAARQVGTTVTVSKLFSPLPVRHKEFLR
NVRREYSRMIAILQAYALISKNVRLVCTNLVGKSSRSTILRTQGGSVRENIVTIFGPKTM
ACLDPPGSGSGRGSSDRQFFFVNGRPVDLPKFSKLLNELYKSFNSQQYPMAVLNFRLPTT
AYDVNVTPDKRKLFLHSESSFMDGLRNALGNLYAPNKYTYAVHEVEEQKSYMADLQTQVD
IEAGVEEVGASDEEQNEDEDDEAEPEVSKPLDFFAFSHEDVSIKTSVRPARVALADKKCS
VQGKLTGFVPQKRRTEDSKELLSEEPVLKRRATTMELKAPPNAFPKEKNFETARPADHSS
NPQNRSATDGEALGEECGGLLSEAPLLKKCAKILGQFNLGFIIARLDSDLFIIDQHASDE
KYNFERLSKSTVLNRQPLLRPMPLHLSSAEEITISTHMEVFRQNGFDFTEQEDAPPGQRI
LLSAVPFSKNVTFGVSDVQELVSLLSEDYGSSSSHLVQPSRVRSMLASRACRSSIMIGDA
LSKKEMEKVVRHLADLDAPWNCPHGRPTMRHLYDLNAKKKALLSP
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtgcccggcaagatcagcgccaatccatcccatcgacaaggcatcgattcac
aggatctgctccggccaggtgattctagatcttgccaccgccgtcaaggagctcgtcgag
aacagcctcgatgctggcgccaccagcattgaggtcaagctcaaggagcacggaggggat
gcgattgaggtctcggacaatgggtctggcgtctcctccgataactaccaggtcttcttt
ctttctcttgatctctttggacttacgctcaagtatcacacgtcgaaactctcagatttt
tccgacttgcagtctttgacgtcgtttggatttcgcggggaggctttgagctccctctgc
tcgctggccgacgtaagtattcatacaaggaccaaagaggacgaaacgggaactcgtata
tcttacaaccgcgctggtctcatcgtttctaaagagactgccgctcgccaagtcgggact
actgtgaccgtctcaaagctgttcagtccgctccccgtgcggcacaaggagtttttgcga
aacgtgaggcgggagtacagccgcatgatcgccattttgcaagcttatgcactgatttcc
aaaaacgttcgcctggtgtgcacgaacttggttggcaaaagcagtcgctccacgattcta
cgcacacagggtggctctgtcagggaaaacatcgtcaccatctttggtcccaagacgatg
gcgtgcttggatcctccggggtccggctctggcagaggatcgagcgaccgccagtttttc
ttcgtcaatggacgaccggtggacttgccaaagtttagcaagctgctaaacgagctctat
aaatcttttaactcacagcagtacccgatggctgtgctcaactttcggcttccaacaaca
gcgtacgacgtgaatgtaactccggacaaacgcaagctctttcttcactcggaaagctcg
ttcatggacggtcttaggaacgctcttggtaacttatacgctcccaacaagtacacgtac
gcggtccatgaggtggaggagcagaagtcctatatggcggacttgcaaactcaggtagat
atcgaggctggagttgaagaagttggagctagtgatgaagaacagaatgaagatgaagat
gacgaagcggagccagaagtttcgaagcctctggacttcttcgctttttctcatgaggat
gtgagcatcaaaacatctgtgaggccggccagggtggcacttgcggataagaaatgttcc
gtccaggggaagctgactggatttgttccgcaaaaaagaagaactgaagactccaaagag
ctgcttagtgaagaaccagtgctcaagagacgcgcaacgacgatggaactcaaagctcct
ccaaatgcttttccgaaggagaaaaacttcgagactgctagaccggctgatcactcgtcg
aatccacagaatagatcggcgacagatggtgaggctcttggtgaagaatgtggaggcctt
ctaagtgaagcgccattgctgaagaagtgtgcaaagatacttggtcagttcaaccttgga
tttattattgcgaggctggactctgatttgtttattatcgatcagcatgcgtctgacgaa
aagtataactttgagcggttgtccaagtccacagtcttaaaccggcaacctcttctcagg
ccaatgccgctacatttatcttcagcggaggaaatcaccatctcgacacacatggaagta
ttcaggcaaaatggcttcgattttactgagcaagaggacgcgcctcccgggcaaaggatt
ctcttgtctgccgtcccattcagcaaaaatgttacctttggcgtctcagatgtccaagag
ctagtgtcgctcttatcggaagattatgggagcagctcctcccatctcgtccagccatcg
cgggtgcgctcaatgctcgcttcacgcgcctgccggtcgtcgattatgatcggcgatgcc
ttgagtaagaaagaaatggaaaaggttgtgaggcatcttgcagacttggacgcgccttgg
aactgtccgcatggacgtcccaccatgcggcatctgtatgatctaaacgccaagaaaaag
gccttgctgtcaccgtga
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