KEGG   Selaginella moellendorffii: SELMODRAFT_442170
Entry
SELMODRAFT_442170 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K13025  ATP-dependent RNA helicase [EC:3.6.4.13]
Organism
smo  Selaginella moellendorffii
Pathway
smo03013  Nucleocytoplasmic transport
smo03015  mRNA surveillance pathway
smo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SELMODRAFT_442170
  09122 Translation
   03013 Nucleocytoplasmic transport
    SELMODRAFT_442170
   03015 mRNA surveillance pathway
    SELMODRAFT_442170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_442170
   03041 Spliceosome [BR:smo03041]
    SELMODRAFT_442170
   03009 Ribosome biogenesis [BR:smo03009]
    SELMODRAFT_442170
   03012 Translation factors [BR:smo03012]
    SELMODRAFT_442170
Enzymes [BR:smo01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     SELMODRAFT_442170
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     SELMODRAFT_442170
   mRNA cycle factors
    Stress granule specific factors
     SELMODRAFT_442170
Spliceosome [BR:smo03041]
 Complex C
  Other components
   EJC/TREX
    SELMODRAFT_442170
Ribosome biogenesis [BR:smo03009]
 Eukaryotic type
  90S particles
   Helicases
    SELMODRAFT_442170
Translation factors [BR:smo03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    SELMODRAFT_442170
SSDB
Motif
Pfam: Helicase_C
Other DBs
NCBI-GeneID: 9642622
NCBI-ProteinID: XP_002973556
JGI: 442170
UniProt: D8RRB7
LinkDB
Position
Unknown
AA seq 195 aa
MGRLAEEGIKQFGVSAFGEATKPELLGAICLGLRIPHAVVFCNTESACKFLATRLRRENL
SALVLPGMPPDERADAIDQFVSYDVNILVTTGAWPQDLPVESAEVVYMYDFPESSDSYVK
QIGECDKPGVREALVITFVRDFQDSWRERLEAECCTRIEPLPEHITGLYRRCFPIVVTPA
AWNSIQKLAKKHGLL
NT seq 588 nt   +upstreamnt  +downstreamnt
atgggccgactagcggaagagggcatcaagcagtttggcgtgagcgcctttggcgaggct
acaaagccggagttgctgggagccatctgcctcggtcttcggatcccgcacgccgtggtc
ttctgcaacactgaatcagcgtgcaaatttctggccacacgattgcgccgagagaacttg
agcgctctcgttctccctggcatgcctcccgacgagcgagcagacgctattgaccaattt
gtgagctacgacgtcaatattttggtcacaacgggtgcttggccacaggatttacccgtg
gaaagtgcggaagtggtctacatgtacgactttcctgagagcagcgactcctacgtgaag
cagattggggagtgcgacaaacctggcgtccgagaggctttggtgatcacgtttgttcga
gatttccaagactcatggcgggagcgtctcgaggccgagtgctgcacccgtattgagcct
ctccctgagcacatcaccggcctctaccgccgctgcttccctattgtggtgacccctgcg
gcctggaactccattcaaaagctggccaaaaaacacggtttgctgtag

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