Selaginella moellendorffii: SELMODRAFT_442170
Help
Entry
SELMODRAFT_442170 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
3.6.4.13
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03013
Nucleocytoplasmic transport
smo03015
mRNA surveillance pathway
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_442170
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_442170
03015 mRNA surveillance pathway
SELMODRAFT_442170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_442170
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_442170
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_442170
03012 Translation factors [BR:
smo03012
]
SELMODRAFT_442170
Enzymes [BR:
smo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
SELMODRAFT_442170
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SELMODRAFT_442170
mRNA cycle factors
Stress granule specific factors
SELMODRAFT_442170
Spliceosome [BR:
smo03041
]
Complex C
Other components
EJC/TREX
SELMODRAFT_442170
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
Helicases
SELMODRAFT_442170
Translation factors [BR:
smo03012
]
Eukaryotic type
Initiation factors
eIF-4
SELMODRAFT_442170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
Motif
Other DBs
NCBI-GeneID:
9642622
NCBI-ProteinID:
XP_002973556
JGI:
442170
UniProt:
D8RRB7
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MGRLAEEGIKQFGVSAFGEATKPELLGAICLGLRIPHAVVFCNTESACKFLATRLRRENL
SALVLPGMPPDERADAIDQFVSYDVNILVTTGAWPQDLPVESAEVVYMYDFPESSDSYVK
QIGECDKPGVREALVITFVRDFQDSWRERLEAECCTRIEPLPEHITGLYRRCFPIVVTPA
AWNSIQKLAKKHGLL
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgggccgactagcggaagagggcatcaagcagtttggcgtgagcgcctttggcgaggct
acaaagccggagttgctgggagccatctgcctcggtcttcggatcccgcacgccgtggtc
ttctgcaacactgaatcagcgtgcaaatttctggccacacgattgcgccgagagaacttg
agcgctctcgttctccctggcatgcctcccgacgagcgagcagacgctattgaccaattt
gtgagctacgacgtcaatattttggtcacaacgggtgcttggccacaggatttacccgtg
gaaagtgcggaagtggtctacatgtacgactttcctgagagcagcgactcctacgtgaag
cagattggggagtgcgacaaacctggcgtccgagaggctttggtgatcacgtttgttcga
gatttccaagactcatggcgggagcgtctcgaggccgagtgctgcacccgtattgagcct
ctccctgagcacatcaccggcctctaccgccgctgcttccctattgtggtgacccctgcg
gcctggaactccattcaaaagctggccaaaaaacacggtttgctgtag
DBGET
integrated database retrieval system