Sordaria macrospora: 10801564
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Entry
10801564 CDS
T01610
Symbol
SMAC4_06484
Name
(RefSeq) uncharacterized protein
KO
K03678
exosome complex component RRP45
Organism
smp
Sordaria macrospora
Pathway
smp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
10801564 (SMAC4_06484)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10801564 (SMAC4_06484)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
10801564 (SMAC4_06484)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
10801564
NCBI-ProteinID:
XP_003344283
UniProt:
F7VYH8
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All DBs
Position
4:complement(join(1193733..1194459,1194538..1194704))
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AA seq
297 aa
AA seq
DB search
MPREAEPSANEKAFLLKALQDEQIRLDGREFDQYRPLELTFGDEYGVANVSLGKTKILAK
ASAEVTVPFADRPLDGIFTIATELSPMAAPHFEVNRPTETEVLLSRLLEKTVRRSGALDT
ESLCLVAGQKCWSVRVDVHVLSHDGNLTDAACFAVVAALRHFRKPDTSMENGVLTVYTPA
EREPVPLGWLHSPFCVTWSFFGDEGETALLDADWMEEQVRVASLTISLNRHGEICQIAKL
GGVPVEAVALLQCTSVALTKVKDFSTFLDGKLAEDAKRRDKGGFMAELRAENDRVVG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcccagagaagcagaaccatcagccaatgagaaggccttcctcctgaaggcgcttcaa
gatgaacagatacgtctcgatggccgcgaattcgaccaataccgcccgctagagctcacc
tttggagacgaatatggcgtcgcgaatgtatcacttggcaagacaaagatcctcgccaaa
gcctccgccgaagtaacagtcccctttgccgaccggcccctcgacggcatcttcaccatc
gccaccgaactctcccccatggctgcgcctcacttcgaagtgaaccggcccaccgaaacc
gaagtcctcttgtctcgcctgctcgaaaagacggtccgccgctccggcgcgctcgacacc
gagtcgctctgtctggtggccggccaaaagtgctggtccgtccgcgttgacgtgcacgtc
ctgtctcacgacggcaacctgacggacgcggcctgcttcgccgtcgtcgccgccctgcgc
cacttccgcaagcccgacaccagcatggagaacggcgtgttgacagtttacacgcccgca
gagcgggagccggttcctctggggtggctacactcgcccttttgcgtgacgtggagcttc
tttggcgacgagggcgagacggcgctgttggatgcggactggatggaggagcaggttagg
gtcgccagccttacgattagtctgaacaggcacggcgagatctgccagatcgccaagctg
ggaggtgttcccgtggaggcggttgcgctgctgcagtgtaccagcgtggcgttgacgaag
gtgaaggacttctcgacgttcttggatggcaagttggcggaggacgcgaagaggagggac
aagggtgggtttatggctgagttgagggcggagaatgatcgtgttgttgggtga
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