Sordaria macrospora: SMAC_01213
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Entry
SMAC_01213 CDS
T01610
Name
(RefSeq) uncharacterized protein
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
smp
Sordaria macrospora
Pathway
smp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SMAC_01213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smp03041
]
SMAC_01213
Spliceosome [BR:
smp03041
]
Complex B
Other components
Prp19-related factors
SMAC_01213
Complex C
SMAC_01213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
10810017
NCBI-ProteinID:
XP_003352378
UniProt:
F7VQ63
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MPPQIKHDLNRSGWEATDFPSVCENCLPENPYVKMLKEDYGAECKLCTRPFTVFSWAADR
AHARKKRTNICLTCARLKNACQCCILDLQFGLPIIIRDKALELVAPGPQSEINREYFAQN
NERAIEEGRAGIEEYEKADEKARELLRRLAQSKPYFRKGREVDEDGNPVGGSSSGAGRAT
GGNPAVGAGVGGAGPIRTRDSRAAAAAGARPGGGRRPNAAPAPPPGPKDWQPPADQSIMS
LFVTGIEDDLPEFKIRDFFKAFGKIKSLVVSHMSHAAFVNYETREAAEKASLECKGRAVV
AGCPLRVRWSVPKALGTMNKEQRSEMLRDGRSAFGGAQKTGGRKAIEGGTAQGGASGAQK
DETSNLTIAAPPGAADVQYASLSGN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcaaatcaaacacgatctcaaccgctccggttgggaagcgaccgacttcccc
tccgtttgcgaaaactgcctgcccgagaacccttacgtcaaaatgctcaaggaagactac
ggtgccgaatgcaagctctgcacccgcccattcaccgtctttagctgggccgccgaccgc
gcccacgcccgcaagaagcgcaccaacatctgcctcacctgcgcccgcctcaagaacgcc
tgccaatgctgcatcctcgatcttcagttcggactacccatcatcatcagagacaaagcc
ctcgagctcgtggcccccggtcctcagagcgaaatcaaccgcgagtactttgcgcaaaac
aacgagcgcgcgatcgaagaaggaagagctggtatcgaggaatacgaaaaggcggacgag
aaggcgagagagctgctgaggaggctggcgcaaagcaagccctatttcaggaagggtagg
gaggttgacgaagatggcaaccctgtcggcggatcatcgagcggtgctggaagggcgaca
ggaggcaatcctgccgtaggagctggtgttggtggggctggtccgattcgcacaagagac
tccagggcggccgcggctgctggcgccagacccggcggtggacgacgacctaacgctgcc
ccggcgcctcctcccggacccaaggattggcaaccgcctgccgatcagagcatcatgtct
ctcttcgtaaccggcattgaggatgacctgcccgagttcaagatccgtgacttcttcaaa
gcgttcggaaagatcaagtcgttggttgtgtcacacatgtcgcatgccgctttcgtcaac
tacgaaactcgggaggctgctgagaaggcttcgttggagtgcaagggccgtgctgtcgtt
gccggatgccccttgagggtcagatggagcgtacccaaggccttgggaacaatgaacaag
gagcagcgctcggagatgctacgagatggtcggtcagcctttggcggtgctcagaagacg
ggcggccgaaaggcgatcgagggaggaactgctcagggtggtgcatcaggagcgcagaaa
gacgagacatccaacctcactattgcagcaccgcccggtgcagcagacgtgcagtacgcc
agtctttctggcaactaa
DBGET
integrated database retrieval system