Sordaria macrospora: SMAC_04013
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Entry
SMAC_04013 CDS
T01610
Symbol
putative_smc1
Name
(RefSeq) putative SMC1 protein
KO
K06636
structural maintenance of chromosome 1
Organism
smp
Sordaria macrospora
Pathway
smp04111
Cell cycle - yeast
smp04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
SMAC_04013 (putative_smc1)
04113 Meiosis - yeast
SMAC_04013 (putative_smc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smp03036
]
SMAC_04013 (putative_smc1)
Chromosome and associated proteins [BR:
smp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
SMAC_04013 (putative_smc1)
Meiosis-specific proteins
Cohesin complex and associated proteins
SMAC_04013 (putative_smc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_23
AAA_13
TPR_MLP1_2
SbcC_Walker_B
TSC22
Crescentin
MinE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
10805618
NCBI-ProteinID:
XP_003348168
UniProt:
F7W0L0
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MGKLIRLELFNFKSYKGHHTLLFGDSYFTSIIGPNGSGKSNSMDAISFVLGIKSSHLRST
HLRDLVYRGRVMKTSKIQEDGTAAPATNGVNGHEDGEDEDPSQRSSRNDPKTAWVMAVYE
DDAGDEQRWKRTITNSGSSEYRINDRVVTAQQYNDALEAENILIKARNFLVFQGDVEAIA
SQSPQDLTRLIEQISGSLEYKAEYEKLQAEVEQAAENQNFQLHRRRGINSEIKQYQEQKK
EAENFQRKTEERDEAVITHILWKLYHFQRVMDESSAQIQEHQENLKEFRRNVEAFENKLD
AARKEQATVGREMGKVERSIKAKEKDIEDKENSLVPIDEKVAQSTQDMGVLRKRIIEVKK
DRDSQASNISKLQKDLATVEKAQQQFEKQWAETLKKQGKELSDEDRKEYTSLQAEAMKKT
ADNRAKLANLTRQLKSDEVTVNNLKGKIDNFEAAIEKLQTEVKSIKDRRDASQDAVKQLK
TDIADKKKEYNKLQSERVRINQTRTAQEEKLKEILRKLDDAESGRRQNEKETRLRNMISD
LRRIYPGVRGRVGDLCKPKQKKFDEAVITALGRDFDAVVVDTEKVGMDCVQYLKEQRFPP
LTFIPLDNIKVNSSVSAVKGISGARLTIDTIDFDPSLERAISYACGGSVVCDNLHIAKDI
VYGRKIQVKAVTLEGFVIHKAGTMTGGRLPNEKGGKRRFEEHDIQNLQRMAQSLKDEVAA
LAQSGRRSAKEDALFVEFTALEQRLKIQEAELAAFEKNLKSKQKELNHQERQLDDYDPKY
EEKHGELERTRATVQKFEKAISDVEDKIFKDFCKRLGYENVRAYEAQQGTLEQEAAQKRQ
DFDIQKQRIQSNITWETSQHTATSDRIQSLEKTLKRHERDLNSYRQEKASIEEEMAEDRE
ALGELEQNLEELKVSHAEKTKKVQEAKQDLQRRSRDIEVRLKEISNLEAEVQQSSAQKLA
LLRRCKLEQIQIPLQEGSLDDIPNEDVLLQKDQDAMDIDGEDENQEAQLMEAAMDDYGIE
INYDNLDDALLEDANDEVEDKLQEKISALTAEIEKLNPNMRAIERLESVKSRLESTEKDF
EDSRAALKAARDAFNQVKDKRFELFNKAFTHIQEQITHVYKDLTRSDAYPLGGQAYLDIE
EDTDTPYLSGIKYHAMPPLKRFRDMEHLSGGEKTMAALALLFAIHSYQPSPFFVLDEVDA
ALDNANVEKIKKYIREHAGPGMQFIVISLKAGLFQDSESLVGVYRDQDVNSSKTLTLDLR
KYN
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagctcatccgtctcgagcttttcaacttcaagtcctacaagggccaccatacc
ctcttgtttggcgactcctacttcacctccattatcggtcccaatggctctggaaagtca
aactcgatggatgccatctccttcgtcttgggcatcaaatcatcacacctccgatcgacc
catcttcgagacctggtctaccgtggccgtgttatgaaaacctcgaaaatccaagaagat
ggcacagctgcccccgctactaacggcgtcaacgggcacgaagatggcgaagacgaagac
ccttcccagcggtcatctaggaatgaccccaagacggcctgggtcatggccgtttacgaa
gacgatgctggcgacgagcaacggtggaagcgaaccattacaaacagtggctccagcgag
taccgcattaacgacagagtggtcaccgcccagcagtacaacgatgcgctcgaggccgaa
aatatcctgatcaaggcccgtaacttcctggtcttccagggagacgttgaagccattgcc
tcgcagtcacctcaggaccttacacgcttgatcgaacaaatatccggaagtctcgaatac
aaggccgaatatgagaagttgcaggccgaggttgagcaggctgccgagaaccagaatttc
cagctacaccggagaagaggtatcaactcggaaatcaagcagtatcaggagcaaaagaag
gaagctgaaaacttccagcggaaaaccgaggaacgagacgaggccgtcatcactcatatt
ttgtggaagctgtaccactttcagagggtcatggatgagtctagcgcgcaaatccaggag
caccaggaaaatctgaaggagttccgtcgcaacgttgaagccttcgaaaacaaactggat
gctgctcgtaaggagcaggctacggtagggcgtgagatgggcaaggtggagaggagcatc
aaggccaaggaaaaggacatcgaagacaaggaaaacagtcttgtgccaatcgatgaaaag
gttgcgcaaagcacccaagatatgggtgtgctacggaagcgcattatcgaggtgaaaaag
gaccgcgacagccaagcatccaacatctccaaattgcaaaaggacctcgccaccgtggag
aaagcgcagcagcaattcgaaaaacaatgggccgagacactcaagaagcaaggcaaggag
ctcagtgatgaagaccgcaaggaatacactagtctccaagccgaggctatgaagaaaact
gccgacaaccgggccaagctggccaacctcacgcgccagctcaagagcgacgaggtcacc
gtcaacaacctgaaaggtaaaatcgacaactttgaggccgctatcgaaaagctgcagacc
gaggttaagtcgatcaaggatcgaagagacgccagccaggatgcggtaaaacaactcaaa
accgatatcgccgacaagaagaaggagtataacaaactccagtctgagcgcgtaaggata
aaccagacccgaactgcccaggaggagaagctgaaggaaatccttcgcaaactggacgat
gcggaatctggccggcgtcagaatgaaaaggagacgaggttgaggaacatgatcagcgac
ctcaggcgcatttacccaggtgtccgaggccgggttggcgatctctgcaaacccaaacag
aaaaagttcgacgaggcggttatcacagcccttggacgtgacttcgatgcagtcgtcgtg
gacaccgagaaggtcggtatggattgcgtgcagtatctcaaggagcagcgattccctccc
ttgacgtttattccgctcgacaatatcaaggtcaacagctcagtttcggcagttaaaggc
atttccggagcacgactgaccattgatacaatcgactttgatccttccctcgagcgtgcc
atcagctacgcatgcggtggatctgttgtttgcgataacctccatatcgcaaaggacatc
gtatacggcagaaagatccaagtcaaggctgtcaccctggaaggtttcgtaatccacaag
gctggtaccatgaccggtggccgcttgcctaatgagaagggcggcaagcgtcgctttgaa
gaacatgacattcagaacctgcaacggatggcacagtccctgaaagacgaggtggcagct
ctggcgcagtctgggcgacgaagtgctaaggaggatgctttgttcgtcgagttcacagcg
cttgaacaacgcctcaagattcaggaagctgagctggccgccttcgagaagaatctcaag
agcaaacagaaagagctcaatcatcaggagcggcagctggacgactatgaccccaagtat
gaggaaaagcacggtgagctggagcggacgcgggcaacggtacaaaagttcgaaaaggcc
atctcagacgtcgaagataagatcttcaaagatttctgcaagaggctgggctacgagaat
gtccgtgcctatgaagcccaacagggcaccttggaacaagaagctgcccagaagcggcag
gattttgacatccagaaacaacgcatccagagcaatatcacatgggaaacctcacaacac
acggcgaccagcgacaggatacagtcactagaaaagaccctgaaacggcacgaacgagat
ctgaattcataccgacaagagaaggcctccattgaggaggagatggcggaagaccgggag
gcgctcggggagcttgaacagaatctagaagagctgaaggtttcccatgcagaaaagacc
aagaaggtacaggaggctaagcaagacctacagaggaggagcagagacattgaagtcagg
ttaaaggagatcagcaacctggaggctgaagtacagcagagtagtgcccagaaactcgcc
ctgctaaggagatgcaagcttgagcagattcaaattcctcttcaagaaggctcgcttgac
gacattcccaatgaggacgtactgctccagaaggaccaggatgctatggacatcgatggc
gaagacgaaaaccaggaagcgcaacttatggaggctgccatggacgactacggcatcgag
atcaactacgacaacctcgatgacgcactactggaagacgcgaatgatgaagtcgaagac
aagctgcaagaaaagatctcggcactcaccgccgagatcgagaagctcaaccccaacatg
cgcgccatcgagcgtctcgaatcggtcaagtcgcgcctcgagtcgaccgaaaaggacttt
gaggactcgcgcgccgccctcaaggccgcccgcgacgccttcaaccaggtcaaggacaag
cgcttcgagctcttcaacaaggccttcacgcacatccaggagcagatcacgcacgtgtac
aaagacctcacacgctccgacgcgtacccgctcggcggccaggcgtacctggacatcgag
gaggacaccgacaccccttacctgtcgggcatcaagtaccacgccatgccgccgctcaag
cggttccgcgacatggagcacctgtccggaggcgagaagaccatggcggcgctggcgctg
ctgttcgccatccacagctaccagccgtcgcccttcttcgtgctggacgaggtggacgcg
gcgctcgacaacgccaacgtggagaagatcaagaagtacatccgcgagcatgccgggccc
ggaatgcagttcatcgtcatcagtctcaaggccgggctgttccaggatagcgagagtctg
gtgggcgtttatcgtgatcaggatgtgaatagctcaaagactttgactttggatcttcgc
aagtacaactaa
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integrated database retrieval system