Sinorhizobium meliloti BL225C: SinmeB_3919
Help
Entry
SinmeB_3919 CDS
T01884
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smq
Sinorhizobium meliloti BL225C
Pathway
smq00040
Pentose and glucuronate interconversions
smq01100
Metabolic pathways
smq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SinmeB_3919
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SinmeB_3919
Enzymes [BR:
smq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SinmeB_3919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP3_bac
Motif
Other DBs
NCBI-ProteinID:
AEG08227
LinkDB
All DBs
Position
pSINMEB02:complement(514059..515507)
Genome browser
AA seq
482 aa
AA seq
DB search
MTVSYQAHDVRAFGFTIARCLILAGLACGSWVGFSRQALAQAALAEPLSPKLPDGRQRAF
PTAEGFGAGSLGGRGGKVIYVVNTNESGQGSLRACIEASGPRICIFRTGGTIVLREGSLV
VRHPFLTIAGETAPGGGIAIRNGETQIRPSIEIVTNDVIIRHIRLRPGPHAVKACCSGGL
GMYSSSAKDIMLDHISASWGSDETIDSEDASNFTWQWGIASEPLLRGGPGKDKRARNMLF
TKGGNVSVHHSLFAFGQFRNPLIKMKIPGAVADVVNNVFFSPKWQYVLSFGDEWARIQAN
VVGNYKIAGEKLRDDHMVHLFEESGRGHAIYLKDNYDEPYRTGASEDDTLVLAEKQRRFV
STSAFDAPAVRASAPEIAYEDVLAGAGATKPRRDAVDRRITEAVRNRSGRLLVNDPQDVG
GWPELDAGVPYPDSDMDGISDDWEVESGTDPADASDGRQDLDGDGWTNLEAFLHFMAGDT
AD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacggtaagctaccaagcgcatgacgtaagggcatttggtttcaccatagcgcgttgc
ctgattttggcggggttggcctgcggatcatgggtcggcttctcgcggcaagctctagcc
caggcggcactggccgagcctctttcacccaagcttccggacggcagacaacgcgccttt
cccacggccgaaggcttcggcgccggctctcttggaggccgggggggtaaggtgatctat
gtcgtcaacacaaacgaatcagggcagggctccttacgtgcgtgcatcgaggcatccggc
ccgcgcatttgtattttccgcacgggtggcaccattgttcttcgcgaaggatcgctggtc
gtccgacatccattcctgacgattgccggagagacggcgccgggcggcgggatcgccatc
cggaacggcgagacgcaaattcgtccttcaatcgaaatcgtgaccaatgacgtgatcatc
aggcacattcgtcttcgccccggtccgcatgccgtgaaggcttgctgttccggaggcctc
ggaatgtactccagctcggcgaaggacatcatgctcgatcatatctccgccagctgggga
tcagacgagacgatcgattcggaagacgcgagtaacttcacctggcagtggggtattgcg
agcgaaccgttgctgcggggcggccccgggaaagacaagcgtgcgcgcaacatgttgttc
acgaagggcggcaacgtctccgtgcatcactctctcttcgctttcggccagttcagaaac
cccctgataaagatgaagattcccggcgccgtcgccgatgtcgtgaacaacgtgtttttc
tcaccgaagtggcaatatgtcctaagcttcggcgatgaatgggcgcggatccaggctaat
gtggtcggcaactacaagatcgcgggggaaaagctgcgagacgatcatatggttcatctc
ttcgaagaaagcggacgcgggcacgcgatctatttgaaggacaattacgacgaaccatat
cgcactggcgccagcgaggatgacaccctcgttttggccgagaaacaaagaaggttcgtt
tcaacgtcggcattcgatgcaccggcggtccgcgcttctgcgcccgaaattgcttacgag
gacgtcctggcaggtgccggtgcgacgaagcctcggcgcgacgcggtcgatcgccgcatc
accgaggcggtcagaaatcgcagcggacgactgctcgtgaacgatccgcaggacgtcggc
ggttggccggaactcgatgccggggtgccgtacccggacagcgacatggacggtatctcg
gatgactgggaggtcgaaagcggcaccgatccggcagatgccagcgatgggcgacaggac
ttggatggcgacggatggacaaatctcgaagcgtttctccatttcatggcgggcgatacc
gcggattaa
DBGET
integrated database retrieval system