Skermanella mucosa: JL100_013645
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Entry
JL100_013645 CDS
T07652
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00970
Aminoacyl-tRNA biosynthesis
smuc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JL100_013645 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
smuc03029
]
JL100_013645 (gatB)
Enzymes [BR:
smuc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
JL100_013645 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
JL100_013645 (gatB)
Mitochondrial biogenesis [BR:
smuc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
JL100_013645 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
UEM23732
LinkDB
All DBs
Position
SKMUc:complement(2980854..2982308)
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AA seq
484 aa
AA seq
DB search
MTSLIKGETGDWEVVIGLEVHAQVISNAKLFSGASTLFGAEPNTQVSFVDAAFPGMLPVI
NEHCVEQAVRTGLGLKAQINLFSVFDRKNYFYADLPSGYQISQFQQPIVGKGEIVLDMPD
GTSRTVGVTRLHLEMDAGKSVHDLHPSRTYVDLNRSGVALMEIVSEPDMRTSEEAAAYVR
KLRAILRYLGTCDGNMEEGSMRCDVNVSVRRPGEPYGTRTETKNVNSIRYVQMAIDYEVQ
RQIEVIEGGGTIVQETRLWDTTKFVTRSMRSKEEAHDYRYFPDPDLLPLELEQSWVDAIK
ATLPELPDDKKARFISDYKLSNYDAGVLVAERASADFYETVAKGRDPKLAANWTMGELFG
ALNKQGKGIDQSPVSAEDLGGLIDLISDNTISGRIAKDVFAEMVATGKPAALIVEEKGLR
QVTDTGAIDSAIDGVLAANPDKVAEYKGGKEKLFGFFVGQVMKQTQGKANPAMVNEILTR
KLNG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgactagtttgatcaagggcgagaccggcgactgggaagtggtgatcgggctggaagtc
catgcccaggtcatttcgaacgcgaaactgttctcgggagcctcgacccttttcggtgcc
gaaccgaacacgcaggtgagtttcgtcgatgccgcgttccccggcatgctgcccgtcatc
aacgagcactgcgtcgagcaggcggtccgcacggggctgggcctgaaggcgcagatcaac
ctgttctcggtgttcgaccgcaagaactacttctacgccgacctgccgtcgggctaccag
atcagccagttccagcagccgatcgtgggcaagggcgagatcgtgctggacatgccggac
ggcaccagccgcaccgtcggcgtcacccgcctccacctggagatggacgccggcaagagc
gtccacgacctgcatccgagccgcacctatgtcgacctcaaccggtccggcgtcgccctg
atggagatcgtctcggagccggacatgcgcacctcggaggaggccgcggcctatgtccgg
aagctgcgggcgatccttcgctatctcggcacctgcgacggcaacatggaggaaggctcc
atgcgctgcgacgtcaacgtgtcggtgcggcggccgggcgagccctacggcacgcggacc
gagacgaagaacgtcaactcgatccgctacgtccagatggcgatcgactacgaagttcag
cgccagatcgaggtgatcgagggcggcggcacgatcgttcaggagacgcggctgtgggac
acgaccaagttcgtgacccggtcgatgcgcagcaaggaggaggcgcacgactaccgctac
ttccccgaccccgacctgctgccgctggagctggagcagtcctgggtcgatgcgatcaag
gcgaccctgccggaactgcccgacgacaagaaggcgcgcttcatcagcgactacaagctg
tcgaactatgacgccggcgtgctggtcgcggaacgggcgagcgccgacttctacgagacc
gtcgccaagggccgcgatccgaagctggccgccaactggaccatgggcgagctgttcggc
gcgctcaacaagcagggcaaggggatcgatcagtcgccggtctcggccgaggacctgggc
ggcctgatcgacctgatctccgacaatacgatcagcggccgcatcgccaaggacgtgttc
gccgagatggtcgcgaccggcaagccggcggccctgatcgtcgaggagaagggcctgcgc
caggtgaccgacacgggcgccatcgacagcgcgatcgatggcgtgctggcggccaacccg
gacaaggtcgccgagtacaagggcggtaaggagaagctgttcggcttcttcgtcggccag
gtcatgaagcagacccagggcaaggccaacccggccatggttaacgagatcctgaccagg
aagctgaacggctga
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