Skermanella mucosa: JL100_017095
Help
Entry
JL100_017095 CDS
T07652
Name
(GenBank) molybdopterin-dependent oxidoreductase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00630
Glyoxylate and dicarboxylate metabolism
smuc00680
Methane metabolism
smuc01100
Metabolic pathways
smuc01120
Microbial metabolism in diverse environments
smuc01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JL100_017095
09102 Energy metabolism
00680 Methane metabolism
JL100_017095
Enzymes [BR:
smuc01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
JL100_017095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Motif
Other DBs
NCBI-ProteinID:
UEM18813
LinkDB
All DBs
Position
SKMUc:complement(3699941..3702832)
Genome browser
AA seq
963 aa
AA seq
DB search
MLVKRRSGTAQRSPLASTLAAAANAGGPLDRRTFLRNSGLAAGGMAALGALPLATVRKAE
AGPIDPDLEVTRRKSICTHCSVGCTVIAEVQNGVWVGQEPGWDSPISQGTHCAKGASVRE
LTKGERRNKYPVKLVNGEWQRISWDQAIDEIGDKLLEIREKSGPDSVFWLGSAKFSNEGA
YLYRKFAALWGTNTVDHQARICHSTTVAGVANTWGYGAMTNSYNDIQNAKALMIIGGNPA
EAHPVSMQHMLRAKEHNRAPFIVIDPRFTRTAAHATDFIRIRPGTDIPVIWGMLWHIFEN
GWEDKEYIRQRVYGMDEIRAEVKKWHPAEVERVTGVPGDQLRKVTEMMAKNKPSTLIWCM
GATQKTVGTANVRAFSIFQLALGNIGVEGGGANIYRGHSNVQGATDMGLDVTSLPSYYGL
AEGAWRHWARVWDVDYEWIKGRFASKELMETKGIPTTRWFDAVLAKPGELDQPNNIKAFI
TFGHGGNTVTRMPEMRRGLEALELMVVVDPHPTTFASISDRKNGTYILPACTQFELAGCR
AASNRSLQWSDPVVDPIFESKDDYETMYLLARKLGFADQLFKHITVDGTKPRAEDILREI
NRGSLATGYTGQSPERLKMHMEHQADFDKISMRATTGPLKGEYYGLPWPCWGTPEMNHPG
SAVLYDTSKHVMEGGGTFRARFGIERNGVSLLADGSYSKGSEITDGYPEFTMAVLRKLGW
DTELTSDEMAVINAIGGDNIDQVSWMTDLSMGIIRVALKHGCVPHGNAKARAVAWNLPDP
VPIHREPLYTPRRDLVDEYPALDDRRDFRMTHLGKSIQARDVSKEFPIILTSGRLVEYEG
GGEETRSNPWLAELQQTMFVEVNTRDAERLGIRHQSDVWVYGPEYDSKARVMAFVTDRVG
QGVAFMPFHFSGFWEGVDQRDKYPPGTDPIVLGAPVNAVMTYGYDPVTFMQETKVTLCRI
EPA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcaagagacgctcgggaaccgcccaacgctcgccgctcgcatccaccctggcc
gccgcggccaacgccggcggcccgctggaccgccgcaccttccttcgcaactccggcctg
gccgccggagggatggcggcgctgggggcgctgccgctggccaccgtccgcaaggcggaa
gccgggccgatcgatccggacctggaggtcacccggcgcaagagcatctgcacccactgt
tcggtcggctgcaccgtcatcgccgaggtgcagaacggtgtctgggtcggccaggagccc
ggctgggacagtccgatcagccagggcacgcactgcgccaagggcgcgtcggtccgcgag
ctgaccaaaggcgaacgccgcaacaagtatccggtcaagctggtcaacggcgagtggcaa
cgcatctcctgggaccaggcgatcgacgagatcggcgacaagctgctggagatccgcgag
aagtcgggtccggacagcgtgttctggctgggctccgccaagttctccaacgagggcgcc
tatctctaccgcaagttcgcggccctgtggggcaccaacacggtggaccaccaggcgcgc
atctgccactccacgacggtcgccggcgtcgcgaacacgtggggctacggcgccatgacc
aacagctacaacgacatccagaacgccaaggcgctgatgatcatcggcggcaacccggcc
gaggcgcatcccgtgtcgatgcagcacatgctgcgcgccaaggaacataatcgggcgccg
ttcatcgtcatcgatccccgcttcacccggaccgccgcccacgcgaccgacttcatccgc
atccgccccggcacggacatcccggtgatctggggcatgctctggcacatcttcgagaac
ggctgggaggacaaggaatacatccgccagcgcgtctacggcatggacgagatccgggcc
gaggtgaagaagtggcacccggcggaggtcgagagggtgaccggcgttcccggcgaccag
ctccgcaaggtcaccgagatgatggcgaagaacaagccgtcgaccctgatctggtgcatg
ggcgccacccagaagaccgtcgggaccgccaatgtccgcgctttcagcatcttccagctg
gcgctcggcaatatcggcgtcgagggcggcggggccaacatctaccgcggccacagcaac
gtccagggcgccaccgacatgggcctcgacgtgacctcgctgccgtcctactacgggctc
gccgaaggcgcctggcggcactgggcgcgcgtctgggacgtcgactacgagtggatcaag
ggtcgcttcgcctccaaggaactgatggagaccaagggcatcccgaccacccgctggttc
gacgccgtgctggcgaagccgggcgagctggaccagcccaacaacatcaaggccttcatc
accttcggccatggcggcaacacggtcacccggatgcccgagatgcgccgcggcctggag
gcgctggaactgatggtggtggtcgacccgcacccgaccaccttcgcgtcgatcagcgac
cgcaagaacggcacctatatcctgccggcctgcacccagttcgagctggcgggctgccgc
gccgcgtccaaccggtcgctccagtggtccgatccggtcgtcgacccgatcttcgaatcc
aaggacgactacgagaccatgtacctcctggcccgcaagctcggcttcgcggaccagctc
ttcaagcacatcacggtggacggcaccaagccgagggccgaggacatcctgcgggagatc
aaccgcggctctctggcgaccggctatacgggccagtcccccgagcggctgaagatgcac
atggagcaccaggccgacttcgacaagatcagcatgcgggcgaccacgggaccgttgaag
ggcgagtattacggcctgccctggccgtgctggggcaccccggagatgaatcatcccggt
tccgccgtgctctacgacacctccaagcacgtcatggaaggtggcggcacgttccgcgcg
cgcttcgggatcgagcggaacggcgtcagcctgctggccgacggctcctactccaagggg
tcggagatcaccgacggctatcccgaattcaccatggccgtgctgcggaagctgggctgg
gacaccgagctgacgtccgacgagatggcggtgatcaacgcgatcggcggcgacaacatc
gatcaagtcagctggatgaccgacctgtccatgggcatcatccgggtcgccctgaagcat
ggttgcgtgccccacggcaacgccaaggcgcgggcggtggcctggaacctgccggacccc
gttccgatccaccgcgaaccgctctacaccccgcgccgcgacctggtcgacgaatacccg
gccctggacgaccgccgcgacttccgcatgacccatctgggcaagtcgatccaggcgcgc
gacgtgtcgaaggagttcccgatcatcctgacctcgggccgtctggtcgagtacgagggc
ggcggcgaggagacccggtccaatccgtggctggccgagctgcagcagaccatgttcgtc
gaggtcaacacccgtgacgccgagcggctgggcatccgccaccagtccgacgtctgggtc
tacggcccggaatacgacagcaaggcccgggtcatggctttcgtcacggaccgggtgggg
cagggtgtcgccttcatgccgttccacttctcgggcttctgggagggcgtggaccagcgg
gacaagtatccgccggggaccgatccgatcgtgctgggagccccggtcaacgccgtcatg
acctatggctacgaccctgtgaccttcatgcaggaaaccaaagtgaccctgtgccgcatc
gagccggcttga
DBGET
integrated database retrieval system
