Candidatus Karelsulcia muelleri TETUND: SMTETUND_061
Help
Entry
SMTETUND_061 CDS
T03664
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
smue
Candidatus Karelsulcia muelleri TETUND
Pathway
smue03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smue00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SMTETUND_061 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smue03021
]
SMTETUND_061 (rpoB)
03400 DNA repair and recombination proteins [BR:
smue03400
]
SMTETUND_061 (rpoB)
Enzymes [BR:
smue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SMTETUND_061 (rpoB)
Transcription machinery [BR:
smue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SMTETUND_061 (rpoB)
DNA repair and recombination proteins [BR:
smue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SMTETUND_061 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AHL31167
LinkDB
All DBs
Position
complement(66494..70402)
Genome browser
AA seq
1302 aa
AA seq
DB search
MKTIKQFLKMKQMKTIQQFLIMKNKQKMKFIENTERINFSLVKTNSYYSDFLEIQIKSFT
NFFKLDSTSMKRKKEGLYKAFLEYFPISDSKSQFILEFLDYLIDPPRYSLEECLQRGLTY
SVSIKVRLKFYCTNPEYSTFETVYQDIYIGSCPYMTPTGSFIFNGSERVIVSQLQKSPGI
FFGQYSHPNGNNLAYAKLIPSKGVCMEFSIDINNVLSVSIDQSKKFPITTLLRAIGYSKD
QDILNIFELADKFILTKKNSNQLLGKYMAANILKTSFEDWIDEKTGELISLEKNEILLKR
NIFLNKNHIKKLLQCKMKEIYLYKKKNFYYSIIHNTLQKDPTNSKKEALDFIYKQVNNCD
PPSHLSSKELIKKLIFSERNYSLGEVGRYKLNKTLKVDIPLTYNILSKEDLISIIEHLIE
LNNSTKEIEDIDHLSNRRVKTVGEQLYTQYVLGIAKIARIIKEKINLKKKIYITPLELIK
AKTLTSVINTFFGTNPLSQFMDQTNPLAEITHKRRLSSLGQGGILRERAGFEVRDVNSSH
YGRLCPLETPEGPNIGLISSLCVFAKINSMGFLETPYLRVKDGKVLLKKKPLYLSAEQET
GKLIAQANAILNHKTGELKPKLLVREDSDFTLVNYKKVDYIDLSTNQIASISASLIPFLE
HDDANRALMGSNMMRQAVPLLNPQVPIVGTGLEKHLAYDSRMLIYAEADGIVDSVSANVI
KIKYFMSETEKLLSFEKRIKKYKLIKFRKTNQNTCINLRPIVKKGMKVVTNQVLCEGYAT
KNGELALGINLKVAFMPFKGYNFEDAIVISEKVLREDWFTSIHIDEYSIEVRDTQFGMEE
LTNDLPNFNEEDIKNLDENGMIRIGSKVKPGDIIIGKLTTKIDKNPSPEKKLLKAIFGER
AVNRKNVSLKADPSLFGVVIDKKLYSRSENTEEYKIKKHLKLEKLNVSFKKNLEKLKDLL
RKKLHSLLEGDISEGVRNSSNKEIILKGKKITLKVLKTIENFSNIISPNWVKDNLKNKLV
LKLINNFNLKKNQLKIKLKKKQNRILIGDELPPGVFKLAKVFIAKKRKLKVGDKMSGRHG
NKGIVAIILKEEDMPYLEDGTPIDLVLNPLGVPSRMNIGQIYETILGWAGEKLGINFSTP
IFDGASLDEISKYTDKANFPRFGNTYLFDGETGEKFEQPVTVGVIYMLKLNHMVDDKLHA
RSIGPYSLITQQPLGGKSQFGGQRFGEMEVWALESFGAANILREILTIKSDDVIGRANTF
EAIVKGNQLPIPGVPESFKVLISELKGLGLNLSLEEEEEEDF
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaattaaacaatttctgaagatgaaacaaatgaaaacaattcaacaatttctg
attatgaaaaacaaacaaaaaatgaaatttatagagaatacagaaagaattaatttttct
ttagtaaaaactaattcttattattcagattttttagagattcaaataaaatcttttaca
aacttttttaaacttgattcaacttctatgaagagaaaaaaggaaggattatataaagct
tttttagaatattttccaatatcagattctaaaagtcaatttatcttagaatttctagat
tatttaatagatcctcctagatattcattagaagaatgtcttcaaagaggtttaacctat
agtgtttctattaaagtaagattaaaattctattgtaccaatccagaatattcaacgttt
gaaacagtatatcaagatatatatattggatcttgtccatatatgactccaacaggatca
tttatttttaatggatctgaaagagtaattgtttctcaattacaaaaatccccgggaata
ttttttggacaatattctcatccaaatggaaacaatttggcttatgccaaactaattcct
tctaaaggagtttgtatggaattttcaatagatataaataatgtattgtccgtttctata
gatcaaagtaaaaaattcccgattactactttacttagagcaataggttattctaaagat
caggatattttaaatatctttgagttagctgacaaatttattttaactaaaaaaaattct
aaccaacttttaggaaaatatatggctgcaaacatattaaaaacttcgtttgaagattgg
attgatgaaaaaacaggagaactaatttcattagaaaaaaatgaaattcttttaaagaga
aatatttttttaaataaaaatcatataaaaaaacttcttcagtgtaaaatgaaagaaatt
tatttatataaaaagaaaaatttttattattcaataatccataatactctccaaaaagat
cctacaaattctaaaaaagaagctctggattttatatataaacaagtaaacaattgtgat
ccgccaagtcatttatcttcaaaggaattaattaaaaaattaattttttctgaaagaaac
tattctttaggagaagtaggaagatataaattaaataaaactttaaaagtagatattcca
ttaacttataatattttaagtaaagaagatctaatttctattattgaacatttaattgaa
ttaaataattcaaccaaagaaattgaggatatagatcatctttctaatagaagagtaaaa
acagtaggggaacaattatatacacaatatgtattgggtattgccaaaattgcaagaatt
ataaaagaaaaaattaatctaaaaaagaaaatttatataactcctttagagttaataaaa
gccaaaactttaacatctgttattaatactttttttggaacaaatccattatctcaattt
atggatcaaactaaccctttagctgaaataactcataaaagaagattatcttctttaggg
cagggaggcattttaagagaaagagcaggatttgaagtacgtgatgttaattcttctcat
tatggaagattatgtcctctagaaactcctgaaggacctaatattggattaatatcctct
ttatgtgtttttgcaaaaattaattctatgggatttctagaaactccttatttaagagta
aaagatggcaaagttcttttaaagaaaaaaccattatatcttagtgctgaacaagaaact
ggaaaattaatagcacaagcaaatgcaattttaaatcataaaaccggggaattaaaaccc
aaacttctagttcgcgaagattctgattttactttagtaaattataaaaaagtagattat
atagatctatcgactaatcaaatagcttctatttcagcatctttaataccatttcttgaa
catgatgatgccaatagagcgttaatggggtcaaatatgatgcgtcaagcagttccttta
ttaaatcctcaagtacctattgtaggaactggattagaaaaacatttagcctatgattca
cgaatgttaatatatgcagaagcagatggaatcgtagattcagtatctgcaaatgttatt
aaaataaaatattttatgtctgaaacagaaaaattactttcttttgaaaaaagaattaaa
aaatataaattaattaaatttagaaaaactaatcaaaatacttgtataaatttaagacca
atagtaaaaaaaggtatgaaagtggtgacaaatcaagttttatgtgaaggatatgctact
aaaaacggagaattagcattaggtataaatcttaaagtagcttttatgccattcaaagga
tataattttgaagatgcaatagtaatttctgaaaaagtcctccgtgaggactggtttaca
tctattcatatagatgaatattcaatagaagtacgtgatactcaattcggaatggaagaa
ttaacaaatgatcttccaaattttaatgaagaagatattaaaaatttagatgaaaatgga
atgattagaataggatctaaagtaaaacctggagatataattataggaaagctaactact
aaaatagataaaaatccttctccagaaaaaaaacttttaaaagcaatttttggggaaaga
gcagtaaatagaaaaaatgtttctttaaaagctgatccatcgttatttggagtagtaata
gataaaaaactttattcaagaagtgaaaatactgaagagtataaaataaagaaacattta
aaattagaaaaattaaatgtttcttttaaaaagaatttagagaaattaaaagatttatta
agaaaaaaacttcattctctattagaaggagatatctctgaaggagtaagaaattcttcc
aataaagaaattattttaaaaggaaaaaaaattactttaaaagttttaaaaacaattgag
aattttagtaatattatttctcctaattgggtaaaagataatttaaaaaataaattagta
ttaaaattaattaataattttaatttaaaaaaaaaccaattaaaaataaaattaaaaaaa
aaacaaaatagaattttaataggagatgaattaccaccaggtgtttttaaacttgctaaa
gtttttattgctaaaaaaagaaaattaaaagtaggtgataaaatgtctggcagacatggc
aataaaggaattgttgctataattttaaaagaagaagatatgccttatttagaagatgga
actccgatagatttagttttaaatccattaggagtaccatcccgaatgaatataggccaa
atttatgaaactattttaggttgggctggagaaaaactaggaataaatttttctaccccc
atttttgatggagcttctttagatgaaatctccaaatatactgataaagctaatttccct
cgttttggaaatacttatttatttgatggagaaacaggagagaaatttgagcaaccagtt
acagtaggtgttatttatatgttaaaattaaatcatatggtggatgataaattacatgct
agatcaataggtccatattcattaattactcaacagccattaggaggaaaatctcaattt
ggaggacaaagatttggtgaaatggaagtttgggctttagaatcttttggagcagcaaat
attttacgtgaaattcttactataaaatctgatgatgtaataggacgtgccaatactttt
gaagcaattgtgaaaggaaaccaattgccaattcctggcgttccagaatcatttaaggtt
ttaattagtgaattaaaaggattagggttaaatctttctttagaagaagaagaagaagaa
gatttttaa
DBGET
integrated database retrieval system
