Serratia marcescens WW4: SMWW4_v1c10220
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Entry
SMWW4_v1c10220 CDS
T02448
Symbol
ispA
Name
(GenBank) geranyltranstransferase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00900
Terpenoid backbone biosynthesis
smw01100
Metabolic pathways
smw01110
Biosynthesis of secondary metabolites
Module
smw_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SMWW4_v1c10220 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
smw01006
]
SMWW4_v1c10220 (ispA)
Enzymes [BR:
smw01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SMWW4_v1c10220 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SMWW4_v1c10220 (ispA)
Prenyltransferases [BR:
smw01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SMWW4_v1c10220 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF2880
Motif
Other DBs
NCBI-ProteinID:
AGE16826
LinkDB
All DBs
Position
complement(1134431..1135351)
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AA seq
306 aa
AA seq
DB search
MSEIAPSAAFADQLQIFRRRADRALLDFIAPLPFNDGNMVAAMRHGALLGGKRLRPFLVY
TTGQMFGVSLSNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILA
GDALQTLAFSILADAEMPDVALRDRLAMVSELATASGVAGMCGGQSLDLEAEGKHVDLQA
LEQIHRHKTGALIRAAVRLGALSAGEAGRAALPQLDRYAAAVGLAFQVQDDILDVVGETE
KIGKRQGADQQHGKSTYPALLGLDSAKAKAWDLYQEALAALDTLAAQSYNTAPLRALASF
IIERDN
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagatcgccccatcggccgcttttgccgatcaactgcagattttccgccggcgc
gccgatcgcgcgctgctggacttcatcgccccgctgccgttcaacgacggcaacatggtg
gcggcgatgcgtcacggcgccttgctgggcggcaagcgtctgcgtccgttcctggtgtac
accaccggccagatgttcggcgtgtcgctgagcaacctggacgcgccggcggcggcggtg
gaatgcatccacgcctactcgctgatccatgacgatctgccggcgatggacgacgacgat
ctgcgccgtggccagccgacctgtcacattaaattcggcgaagccaacgcgatcctggcc
ggcgatgcgctgcaaacgctggcgttttcgatcctggccgatgccgaaatgcccgacgtg
gcgctgcgcgatcggctggcgatggtctccgaactggcgacagccagcggcgtagccggc
atgtgcggcggccaatcgctggatctggaagccgaaggcaagcacgtcgacctgcaggcg
ctggagcagatccaccgccacaaaaccggcgcgctgatccgcgccgcggtgcgtctgggc
gcgctgagcgccggcgaagcaggacgagcggcgctgccgcagctggatcgttacgccgcc
gcggtcggcctggcgttccaggtgcaggatgacattttggacgttgtcggcgaaactgag
aaaatcggcaagcgccagggagcggaccaacaacacggaaagagtacctacccggcgtta
ctcgggcttgacagcgcgaaagcaaaagcgtgggatctctatcaggaagcattagctgca
ttagacactttggcagcgcaatcttataacacagcgccattgcgagcgttagccagcttc
attattgaacgcgacaattaa
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