Serratia marcescens WW4: SMWW4_v1c32650
Help
Entry
SMWW4_v1c32650 CDS
T02448
Symbol
ycjZ
Name
(GenBank) putative DNA-binding transcriptional regulator
KO
K24082
LysR family transcriptional regulator, regulator of peptidoglycan recycling
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smw03000
]
SMWW4_v1c32650 (ycjZ)
Transcription factors [BR:
smw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SMWW4_v1c32650 (ycjZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
AGE19059
LinkDB
All DBs
Position
3522664..3523572
Genome browser
AA seq
302 aa
AA seq
DB search
MKRDEIADLVAFVVVAEERSFTRAAARLGMAQSALSQIVRRIEERLGFRLLTRTTRSVVP
TEAGEQLLSTLGPMLQDLDSVMTSLGELRNRPSGTIRITTVEHAAKTLLLPAMRMLLKSH
PEINVQLIIDYGLSDVVAERFDAGVRLGGEMDKDMIAVRIGPDIPMAIVGAPDYLARRGT
PTSVAQLVDHQAINLYLPTSGTANRWRLMRGGREVRVRMEGQLLLNTIDLILDAALDGHG
LAYLPCDQVQNALDEKKLVRVLDKFTPDLPGYHLYYPHRKHPGSAFSLLIDVLRFNDAQK
PK
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgatgagatagccgatttggtggcatttgtggtggtcgccgaggagcgcagc
ttcacccgggccgcggcccgcctgggcatggcgcagtcggcgttaagccagatcgtccgc
cgcatcgaagaacggctggggtttcgtctgctgacgcgcaccacgcgcagcgtagtgccc
accgaggccggggagcagctcttgtcgaccctgggtcccatgctgcaagacctggattcc
gtcatgacttcactgggcgagctgcgcaaccgcccttccggcaccatacgcatcaccacg
gtggagcatgccgctaaaacccttttgctgcccgccatgcgcatgctgctgaaatctcac
ccagaaattaacgtgcagctcatcatcgattatggtcttagcgatgtggtcgcagaacgt
ttcgatgccggcgtccgtctggggggagagatggataaggatatgattgccgtgcggatt
gggcctgatattccgatggcgatcgttggcgcgccggattatcttgcccggcgaggcacc
ccgacctcggtggcgcaactggtcgatcatcaggcgattaacctctatcttcctacatcg
ggcaccgccaaccgttggcggctcatgcgcgggggacgtgaagttcgggttcgcatggaa
ggtcaactgttgttaaacaccatcgacctgatcctggacgccgctctcgacgggcacggc
ctggcctacctgccttgcgatcaggtgcagaacgcccttgacgagaaaaaactcgtccgc
gtgctggacaagttcaccccggacttgccggggtatcatctttactacccacaccgcaag
cacccaggatcggccttttctttgcttatcgatgtgcttaggtttaacgacgcgcagaag
cccaaatag
DBGET
integrated database retrieval system
