Serratia nematodiphila: NLX84_05005
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Entry
NLX84_05005 CDS
T08619
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
snem
Serratia nematodiphila
Pathway
snem00900
Terpenoid backbone biosynthesis
snem01100
Metabolic pathways
snem01110
Biosynthesis of secondary metabolites
Module
snem_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NLX84_05005 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
snem01006
]
NLX84_05005 (ispA)
Enzymes [BR:
snem01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
NLX84_05005 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
NLX84_05005 (ispA)
Prenyltransferases [BR:
snem01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
NLX84_05005 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF2880
Motif
Other DBs
NCBI-ProteinID:
UTO02438
LinkDB
All DBs
Position
complement(1070841..1071761)
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AA seq
306 aa
AA seq
DB search
MSEIAPSAAFADQLQIFRQRADRALLDFIAPLPFNDGNMVAAMRHGALLGGKRLRPFLVY
TTGQMFGVSLSNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILA
GDALQTLAFSILADAEMPDVALRDRLAMVSELATASGVAGMCGGQSLDLEAEGKRVDLQA
LEQIHRHKTGALIRAAVRLGALSAGEAGRAALPQLDRYAAAVGLAFQVQDDILDVVGETE
KIGKRQGADQQHGKSTYPALLGLDSAKAKAWDLYQEALAALDTLAAQSYNTAPLRALASF
IIERDN
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagatcgccccatcggccgcttttgccgatcaactgcagattttccgccagcgg
gccgatcgcgcgctgctggacttcatcgccccgctgccgttcaacgacggcaacatggtg
gcggcgatgcgtcacggcgccttgctgggcggcaagcgcctgcgtccgttcctggtgtac
accaccggccagatgttcggcgtgtcgctgagcaacctggacgcgccggcggcggcggtg
gaatgcatccacgcctactcgctgatccatgacgatctgccggcgatggacgacgacgat
ctgcgccgtggccagccgacctgtcatattaagttcggcgaagccaacgcgatcctggcc
ggcgatgcgctgcaaacgctggcgttttcgatcctggccgatgccgagatgcccgacgtg
gcgctgcgcgatcggctggcgatggtctccgaactggcgaccgccagcggcgtcgccggc
atgtgcggcggccaatcgctggatctggaagctgaaggcaagcgcgttgatctgcaggcg
ctggaacagatccaccgccacaaaaccggcgcgctgatccgcgcggcggtgcgcctgggc
gcgctgagcgccggcgaagccgggcgagcggcgctgccgcagctggatcgttacgccgcc
gcggttggcctggcgttccaggtgcaggatgacattttggacgttgtcggcgagactgaa
aagatcggcaagcgccagggcgcggaccaacaacacggaaagagtacctacccggcgttg
ctcgggcttgacagcgcgaaagcaaaagcgtgggatctctatcaggaagcattagctgca
ttagacactttggcagcgcaatcttataacacagcgccattgcgagcgttagccagcttc
attattgaacgcgacaattaa
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