Streptomyces nojiriensis: JYK04_05855
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Entry
JYK04_05855 CDS
T07326
Symbol
glyA2
Name
(GenBank) Serine hydroxymethyltransferase 2
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf00260
Glycine, serine and threonine metabolism
snf00460
Cyanoamino acid metabolism
snf00630
Glyoxylate and dicarboxylate metabolism
snf00670
One carbon pool by folate
snf00680
Methane metabolism
snf01100
Metabolic pathways
snf01110
Biosynthesis of secondary metabolites
snf01120
Microbial metabolism in diverse environments
snf01200
Carbon metabolism
snf01230
Biosynthesis of amino acids
snf01240
Biosynthesis of cofactors
snf04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JYK04_05855 (glyA2)
09102 Energy metabolism
00680 Methane metabolism
JYK04_05855 (glyA2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JYK04_05855 (glyA2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JYK04_05855 (glyA2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JYK04_05855 (glyA2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JYK04_05855 (glyA2)
Enzymes [BR:
snf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JYK04_05855 (glyA2)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Met_gamma_lyase
SelA
Motif
Other DBs
NCBI-ProteinID:
QTI48000
LinkDB
All DBs
Position
complement(6224495..6225751)
Genome browser
AA seq
418 aa
AA seq
DB search
MSVLNTPLHELDPDVAAAVDAELVRQQSTLEMIASENFAPVAVMEAQGSVLTNKYAEGYP
GRRYYGGCEHVDVVEQIAIDRIKALFGAEAANVQPHSGAQANAAAMFALLKPGDTIMGLN
LAHGGHLTHGMKINFSGKLYNVVPYHVDETGEVDMAEVERLAKESKPQLIVAGWSAYPRQ
LDFAAFRRIADEVGAYLMVDMAHFAGLVAAGLHPNPVPHAHVVTTTTHKTLGGPRGGVIL
STQELAKKINSAVFPGQQGGPLEHVIAAKAVSFKVAASPEFKERQERTLEGAKILAARLV
QDDVKAVGVDVLTGGTDVHLVLVDLRNSELDGQQAEDRLHEVGITVNRNAIPNDPRPPMV
TSGLRIGTPALATRGFDAEAFTEVAEIIAQALKPAYDSEALKARVSALAAKFPLYPTL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttctcaacaccccgctgcacgagctcgacccggacgtcgccgccgccgtcgac
gccgagctcgtgcgccagcagtccaccctggaaatgatcgcgtcggagaacttcgctccc
gtcgccgtcatggaggcccagggctcggtcctgaccaacaagtacgccgagggctacccg
ggccgccgttactacggtggctgcgagcacgtcgacgtcgtcgagcagatcgcgatcgac
cgcatcaaggcgctgttcggcgccgaggccgcgaacgtccagccgcactccggtgcgcag
gccaacgccgccgcgatgttcgcgctgctgaagccgggcgacacgatcatgggcctcaac
ctggcccacggcggtcacctgacccacggcatgaagatcaacttctccggcaagctctac
aacgtggtcccgtaccacgtcgacgagaccggcgaagtggacatggccgaggtcgagcgc
ctcgccaaggagtccaagccgcagctgatcgtcgccggctggtccgcctacccgcgccag
ctggacttcgccgccttccgccgcatcgcggacgaggtcggcgcgtacctgatggtcgac
atggcgcacttcgccggcctggtcgccgccggtctgcacccgaacccggtgccgcacgcc
cacgtcgtcaccaccaccacgcacaagaccctcggcggtccgcgcggcggtgtcatcctg
tcgacgcaggagctggccaagaagatcaactccgcggtcttcccgggtcagcagggcggc
ccgctggagcacgtgatcgcggccaaggcggtctccttcaaggtcgcggcctcgcccgag
ttcaaggagcgccaggagcgcaccctggagggtgcgaagatcctcgccgcccgcctggtc
caggacgacgtcaaggccgtgggcgtggacgtcctcaccggtggcaccgacgtgcacctg
gtcctggtcgacctgcgcaactccgagctggacggtcagcaggccgaggaccgcctccac
gaggtcggcatcacggtcaaccgcaacgccatcccgaacgacccgcggccgccgatggtc
acctcgggtctgcggatcggtacgccggccctggccacccgcggtttcgacgccgaggcc
ttcaccgaggtcgccgagatcatcgcgcaggcgctgaagcccgcgtacgacagcgaggcc
ctgaaggctcgcgtctccgcgctcgccgcgaagttcccgctgtacccgacgctctaa
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