Salvelinus namaycush (lake trout): 120018575
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Entry
120018575 CDS
T07522
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120018575
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120018575
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Motif
Pfam:
Ion_trans
PKD_channel
YVC1_C
Egg_lysin
Motif
Other DBs
NCBI-GeneID:
120018575
NCBI-ProteinID:
XP_038817715
UniProt:
A0A8U0TIX3
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Position
Sna23:26114735..26122495
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AA seq
635 aa
AA seq
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MWSGKQFVAQPNCQQLLASRWYDEFPGWRRRHWAVKFLTCVFIGLLFPLLSLCYLVSPKS
RYGHFIRQPFIKFICHTTSYLTFLFLLLLASQHIVSTDPNRQGPPPTVVEWMILPWVLGF
IWTEIKQMWDGGFQDYIHDWWNLMDFVMNSLYLATISLKFVAYVKYSGFRARNEWQMWHP
TLVAEAVFAIANIFSSIRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANG
LNQLYFYYETDEGLKGCKGIRCATQNNAFSTLFETLQSLFWSIFGLISLYVTNVEADHQF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGT
LPSPFNIIPSPKSIWYFICWIRKHIFKITRAKKTETFGTIGRRAAINVRINHQYQEVLRN
LVKRYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKGKVGPGGGGVALAGSKP
SEEAGASILVYPDHSFKYSPKFSPATPKTNMFPDTTSIFQQRAAPSSTSSSTSPSTSQGL
NRLVNGSVVPSWASTDTSSTPISSSSSTPIHASTKDMLARKDFPKDICDFGLYSVSEEMG
EADLEVLDCDGEKEEQGGARERTCTEKEENEGKGE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtggagtggaaagcaatttgtagcccagcccaactgtcagcagctgcttgcgtctcgt
tggtacgatgagttccctgggtggaggcgtcgtcactgggcagtgaagttcctaacctgt
gtcttcatcggcctcctcttccccctcttatccctctgctacctggtctctcctaagagc
cgctatggacacttcatcaggcaacccttcatcaagtttatctgccacacaacgtcctat
ctcaccttcctgttcctgctgctgctggcctcccagcacatcgtctctacagaccccaac
agacaggggccgcctcctactgttgtggaatggatgatactaccatgggtactgggcttc
atctggacagagattaaacagatgtgggatggagggttccaggactatatccatgactgg
tggaacctcatggacttcgttatgaactctctctacctggctaccatctctttgaagttc
gttgcctatgtcaagtacagtggcttcagggccaggaacgaatggcagatgtggcatcct
accctggtagcagaggctgtgtttgccatcgctaacatcttcagctccatccgcctcatc
tctctgtttacagctaactcccacctgggacctctacagatctctctgggcaggatgctg
ctggacatccttaagttcctgtttatctactgcctggtgctcctggccttcgctaacggg
ctcaaccagctctacttctactacgagacagacgagggactgaagggatgcaagggcatc
cgctgcgcaacacagaacaacgctttctcaacgttgtttgagacgctccagtcgttgttc
tggtctatctttgggttgatcagtctgtatgtgaccaacgtggaggcagaccatcagttc
acagagtttgtaggggccaccatgttcggaacctataacgtcatctctctggtggttcta
ctcaacatgctgatcgccatgatgaacaactcctaccaacacatcgctgatcatgcagac
attgagtggaagtttgcaagaaccaagttgtggatgagttactttgaagagggggggact
ctgccttctccattcaacatcatccctagccccaagtcaatctggtacttcatctgctgg
atcaggaaacacatcttcaagatcaccagggccaagaaaacagaaacatttggaaccata
gggagacgggctgctataaacgtaagaataaaccaccagtatcaggaggttttgaggaac
ctggtgaagagatatgtagcagccatgatcagagatgccaagacagaggaaggactgact
gaggagaactttaaggagctgaagcaggacatctccagctttaggtatgaggtcctgggg
atgatgaaggggaaggtggggcccgggggtgggggcgtggctctagcaggaagtaaaccc
agtgaagaggcaggggcctccattttggtctaccctgaccactccttcaagtactccccc
aagttctccccagccacgcctaagaccaacatgtttcccgacaccacatccatattccag
cagagggcagccccctcctccacctcctcctccacatccccttccacctctcagggcttg
aaccgactggtcaacggctctgtggtaccctcttgggcctccactgacacctcctccact
cccatctcctcttcctcctccactcccatccatgcctccaccaaagacatgctggccagg
aaagactttcccaaagacatctgtgactttgggctctactctgtgtctgaggagatggga
gaggctgacctggaggtgctggactgtgacggagagaaggaggagcagggtggagcgagg
gagaggacgtgtacagagaaggaagagaacgaagggaagggagagtga
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