Salvelinus namaycush (lake trout): 120019932
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Entry
120019932 CDS
T07522
Name
(RefSeq) phakinin-like
KO
K10379
phakinin
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120019932
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Others
120019932
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Gene cluster
GFIT
Motif
Pfam:
Filament
CCDC22_CC
Sec8_N
AAA_13
FKBP15
ATG17_like
CCDC39
Laminin_II
DUF5798
Baculo_PEP_C
ANC1_spectrin
YfjL_C
TPR
DUF7310
PUMA_CC
DUF3450
Motif
Other DBs
NCBI-GeneID:
120019932
NCBI-ProteinID:
XP_038819271
UniProt:
A0A8U0TKS8
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Position
Sna25:38519658..38527684
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AA seq
405 aa
AA seq
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MPLPRRRSSFLNQPAAKERPGSANTRVGTAGITNAPRGVFVGTAPTGVASSMGTRVSRRA
LGISSVFLQGLRSTAVPVMPHGVGTGGRQYPGGPESLNGCLMEYRDKVHALEQLNQQLEE
QIKHCLDRKASSAGAWGPLRQDWEDVYRHVSESILANARLMLQTENVQANAEDFKDRYEN
EQPFRKAMEEEISSLYKVIDDANLTKSDLESQMDSMRAELRDLACNHEEDVRVLYKQMAG
GEMDEPNAPIETNLDQILAYIRSHWERVIEKNRAETDAYLECKQAESVGSKLSREEEELE
SLKTECNDAGCKIQSLQAQTESIRALKRGLENSLNDARHWHDIELQNLGSVIGKLESELG
DVHGDVEQQRRDYETLLGNKMRLELEIGTYHGILDGEESRYHPSM
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgccgagacgtcgatcctccttcctgaaccaacctgccgccaaggagcgccca
ggtagtgccaacaccagggttggcaccgcaggcatcaccaatgccccccggggcgtcttt
gtggggacggcccccacgggcgtcgcctccagcatgggcacgcgcgtgtcgcgacgcgcc
ctgggcatcagcagtgtgttcctgcaggggctgaggagcacggccgtgcctgtgatgccc
cacggggtcgggaccggtggcaggcagtaccccgggggccccgagagcctcaacggctgc
ctgatggagtacagggacaaggtgcacgccctggagcagctcaaccagcagctggaggag
cagatcaaacactgcctggatcgtaaggcgtccagcgccggagcctggggccccctcaga
caagactgggaggatgtttacagacatgttagtgaatccatccttgccaatgccaggcta
atgctgcagacagagaatgtgcaggccaacgctgaggacttcaaggaccggtatgagaat
gaacagccgttcaggaaggcgatggaggaagagatcagctctctgtacaaggtgattgac
gacgccaacctgaccaagtcggacctggagagccagatggacagcatgagggctgagctt
cgggacttggcctgcaaccacgaggaggacgtgagggtgctctacaagcagatggcaggt
ggcgagatggacgagccgaacgctcccattgagaccaatctggaccagatactggcctac
attcgctcccactgggaaagagtcatcgagaagaaccgtgctgagaccgacgcctacctg
gaatgcaagcaggcggagagtgtgggcagtaaactgagccgtgaggaggaggagctggag
agtctgaagacagagtgtaacgatgctggctgtaagatccagagtctgcaggcccaaact
gagtccatcagagcactgaaacgaggtctggagaactccctgaacgacgccaggcattgg
cacgacatcgagctgcagaacctgggatctgtcatcggcaagctggagtcggagctgggc
gacgtccacggcgacgtcgaacaacagcgtcgcgactatgagacgttgctgggcaacaaa
atgcgtctggaactggaaatcggcacctaccacggcatcttggacggggaggagagccgc
taccacccctccatgtga
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