Salvelinus namaycush (lake trout): 120021722
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Entry
120021722 CDS
T07522
Name
(RefSeq) ras-related protein Rab-39B-like
KO
K07925
Ras-related protein Rab-39B
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120021722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120021722
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
snh04031
]
120021722
Membrane trafficking [BR:
snh04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
120021722
GTP-binding proteins [BR:
snh04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
120021722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_22
Motif
Other DBs
NCBI-GeneID:
120021722
NCBI-ProteinID:
XP_038821494
UniProt:
A0A8U0PCW1
LinkDB
All DBs
Position
Sna26:31730399..31743696
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAHVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLL
VGHKCDLEPQRQVSQQEAEKLAGTYGMRYVETSARDAINVEKAFTELTRDIFELVKSGDI
NIQEGWEGVKSGLVPNVVHSSEEVTKSGRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgatatggctgtaccagtttcgactcatcgtcattggggactcgacagtagga
aagtcgtgcctgatccggcgattcacagagggacgctttgcgcatgtgtccgaccccaca
gtcggtgtagacttcttctcacgcctagtggagatagaaccaggcaaacgcattaaactt
caaatctgggacacagccggacaagagcgattcaggtctattaccagggcttattaccgt
aactctgttggggggctgctgctgtttgacatcaccaaccgtcgctccttccagaatgtg
catgagtggctggaggaggcccggagtcacgtccagcctcacagcattgtctttctgttg
gtgggccacaagtgcgacctggagccccagaggcaggtgagccagcaggaggctgagaag
ctggcaggtacctatggcatgcgctacgtggagacatcggctcgcgacgccatcaacgtg
gaaaaggccttcactgagctaacgcgggacatcttcgagctcgtgaagagcggtgacatc
aacatccaggagggttgggagggggtgaagagtggcttggtgcccaacgtggtgcactcc
tcagaagaggtcaccaagagcggccgccggtgcctctgctga
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integrated database retrieval system
