Salvelinus namaycush (lake trout): 120022292 Help Entry 120022292         CDS       T07522                                  Name (RefSeq) collagen alpha-1(IX) chain-like   KO K08131   collagen type IX alpha Organism snh  Salvelinus namaycush (lake trout) Pathway snh04510   Focal adhesion snh04512   ECM-receptor interaction snh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:snh00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120022292  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     120022292   09142 Cell motility    04820 Cytoskeleton in muscle cells     120022292  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:snh00535]     120022292 Proteoglycans [BR:snh00535]  Extracellular matrix (ECM) proteoglycans   Others    120022292 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Laminin_G_3 Laminin_G_2 Motif Other DBs NCBI-GeneID:  120022292 NCBI-ProteinID:  XP_038822122 UniProt:  A0A8U0PBZ4 LinkDB All DBs Position Sna27:complement(22380080..22400994) Genome browser AA seq 937 aa AA seqDB search MLLYSSTCMALLSLLLSPALSQLDLNRLDGDTAVCPPMRNGQDDLPGFDLITQFQLDVIP LKGVRKVEGSTPLQVAYRLDKEANFQIPTRLNFPRGFPDEYSVMVTFRMIKNTVNKVWNV WQVVDEDGRKQAGLRLNGDQQALEYFLMGQDGNLQTVTFPGLSVLFNTKWHKMMIGVERD QVTLYVDCQPVDKKPIKGKGPVNTEGDTLIGRLDVDADASVVFELQWMLIHCDPKRANRE NCQELPAIEMYANAEPDPKPVPGPLGPTGPEGPRGPHGEDGRDGRDGLPGSPGSAGTTGA KGDQGEIGLPGQRGLSGLPGASGVPGSMGPRGPVGERGLQGFPGPAGSPGPETVGPPGPP GKAGTPGDDGNIGPEGPPGPRGGLGLPGPAGLPGPPGPVGPPGAGKAEGSGDDCPAACPA GPQGNPGLSGMKGHKGLPGDNGAAGEAGQKGEPGPSGVQGLTGKMGDDGQRGSVGFPGSS GDKGDRGPPGFNGIPGPTGPPGSPGMEGIRGRQGLEGEKGDDGAIGPQGDQGPVGAKGDT GTPGADGMDGLPGVDGAKGGAGVPGTVGIRGIVGIPGFPGKQGLVGAGGAKGDTGADGPV GSIGVPGKTGATGPAGEDGKPGDKGTTGETGKQGPVGVTGDTGMQGDKGDKGDTGEKGLK GHTGYKGDQGPIGPTGPKGSEGDPGLTGDSGVKGDQGPSGVPGIKGEVGEKGMRGYTGEN GRPGQPGHEGLTGPQGANGLEGERGLHGSPGPRGLPGPKMNDIKLREVCSAIVEEHLAEF KKEVLKKPAAIGAPGMAGLRGPAGPPGPAGTAGEAGPRGLMGMKGPPGYFGLPGTPGKQG DAGVKGDTGHKGENGVGIPGSSGEPGPQGVAGVPGIGKDGKDGAPGKDGVNGSPGASGSR GATGAPGYCDPSNCIGSPPPLYMMSGGKKSSSYSKGP NT seq 2814 nt NT seq  +upstreamnt  +downstreamnt atgttgctgtactcctctacctgcatggccctcctctctctgctactctctcctgccctc agccagttagatctcaacaggttagatggggacacagctgtctgccctcccatgagaaat ggacaagatgaccttccagggttcgatctgatcacccagttccagttggatgttattcct ctgaagggggtgaggaaggtggagggctccactcctctccaggtggcataccgcctcgat aaggaggccaacttccagattcctaccaggctcaatttcccccggggtttccctgacgag tactccgtcatggtcacattccgtatgataaagaacacggtgaacaaggtgtggaacgtg tggcaggtagtggacgaggacggacggaagcaggcggggctcaggctaaatggagaccag caagcgctggagtacttcctgatgggccaggatggcaacctgcagaccgtcaccttccca gggctctctgtgttgttcaacaccaagtggcacaagatgatgattggggtggagagagac caggtcaccctgtatgtggactgtcagcccgtggacaagaagcccatcaaggggaaaggc cccgtcaacaccgagggagatacacttattgggaggctggacgttgacgctgatgcttct gttgtgtttgaactccagtggatgctgatccattgcgacccaaagagagccaatagagag aactgccaggagctgcctgccatagagatgtatgccaatgctgagcctgaccccaagcct gtccctggccctcttggtcccactggccctgaggggccccgggggccacacggagaggac ggcagagacgggagagatggccttccaggttcacctggcagtgctggcactactggggcc aaaggtgaccagggggagatcggtttgcctggacagagaggcctgtctggcttaccagga gcttctggagtgcctggttcaatgggcccaagaggacctgtgggcgagagaggacttcaa ggttttcctggaccagcaggctctcccggccctgagacagttggaccccccggcccgcct gggaaagcaggaactccaggagacgatgggaacattgggcctgagggtccccctgggcct agagggggtctgggtctccctggtcccgctggtctaccaggaccacctggacctgtgggg ccacctggggctggaaaagctgaggggagtggggatgattgccctgctgcctgtccagct ggaccacagggaaacccagggctatcagggatgaagggacacaagggattaccaggtgac aatggagctgcaggggaagctggacaaaagggtgagccaggaccatctggggtgcagggc ctaacaggcaagatgggagatgatggacaaagaggtagtgttggttttcctggtagttct ggagataaaggagacaggggtccccctggtttcaacggcatcccaggacccaccggacca ccgggttctcctggtatggagggcattcgtggacgtcagggtctggagggagaaaaaggt gatgatggagccatcggtcctcagggagatcagggtcctgttggtgcaaagggagacact ggtactcctggggcagacggcatggatggactccctggagtggatggagctaagggagga gctggcgttcctgggactgtaggaatcaggggtatcgtcggaattccaggtttcccagga aagcaggggctggttggagctggaggtgccaagggtgacacaggagctgacggaccagta ggatcaatcggagttcctgggaaaacaggggcaactggaccagcaggagaagatggaaaa ccaggagacaaaggaactactggcgagaccggaaagcagggaccagtgggggtcacaggt gatacaggcatgcagggtgacaaaggggacaaaggtgacactggtgaaaagggactgaag ggtcacactggatacaagggagaccaaggtcctattggtcccactggcccaaagggaagt gaaggtgatccaggtcttacaggagattctggagtcaagggagaccagggtccttctggt gttcctggaatcaaaggagaggttggagagaagggcatgaggggatatactggggaaaat ggtagaccagggcagccgggtcatgagggtttgaccggtccccagggagccaatggactg gagggagagagagggttacatggatcacctgggcctagaggcctacctggtcctaaaatg aatgatatcaaacttcgtgaagtatgctcagcaattgttgaagaacacttagcagagttt aagaaagaggtcctaaagaaaccagcagcgatcggggcccctggaatggcaggactgcgg ggccccgcaggtccaccgggcccagcagggactgcaggagaggccggtcccagaggactg atgggaatgaagggaccacctggatactttgggttaccaggcacacctggaaaacaaggt gatgctggtgtaaagggggatacaggacataagggagaaaacggagtgggaatcccagga agttcaggcgagccaggcccacaaggtgtggctggcgtccctggcatcgggaaggacggt aaagatggagctcccggtaaagacggtgttaatggtagcccaggtgcctctggttccagg ggggctacaggagccccagggtattgtgacccctcaaactgtataggcagtcccccacct ctctatatgatgagtggggggaagaaatcctccagctacagcaaggggccgtga

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