Salvelinus namaycush (lake trout): 120024029 Help Entry 120024029         CDS       T07522                                  Name (RefSeq) CAD protein-like isoform X1   KO K11540   carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:6.3.5.5 2.1.3.2 3.5.2.3] Organism snh  Salvelinus namaycush (lake trout) Pathway snh00220   Arginine biosynthesis snh00240   Pyrimidine metabolism snh00250   Alanine, aspartate and glutamate metabolism snh01100   Metabolic pathways snh01240   Biosynthesis of cofactors Module snh_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP Brite KEGG Orthology (KO) [BR:snh00001]  09100 Metabolism   09104 Nucleotide metabolism    00240 Pyrimidine metabolism     120024029   09105 Amino acid metabolism    00250 Alanine, aspartate and glutamate metabolism     120024029    00220 Arginine biosynthesis     120024029  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:snh01002]     120024029 Enzymes [BR:snh01000]  2. Transferases   2.1  Transferring one-carbon groups    2.1.3  Carboxy- and carbamoyltransferases     2.1.3.2  aspartate carbamoyltransferase      120024029  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.2  In cyclic amides     3.5.2.3  dihydroorotase      120024029  6. Ligases   6.3  Forming carbon-nitrogen bonds    6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor     6.3.5.5  carbamoyl-phosphate synthase (glutamine-hydrolysing)      120024029 Peptidases and inhibitors [BR:snh01002]  Cysteine peptidases   Family C26: gamma-glutamyl hydrolase family    120024029  Metallo peptidases   Family M38: beta-aspartyl dipeptidase family    120024029 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CPSase_L_D2 CPSase_L_D1 GATase CPSase_sm_chain OTCace_N OTCace CPSase_L_D3 MGS Dala_Dala_lig_C ATP-grasp DHOase ATPgrasp_Ter Amidohydro_1 ATP-grasp_3 Peptidase_C26 LRRC37 Motif Other DBs NCBI-GeneID:  120024029 NCBI-ProteinID:  XP_038824044 UniProt:  A0A8U0PHS5 LinkDB All DBs Position Sna29:17723658..17748737 Genome browser AA seq 2264 aa AA seqDB search MATLILEDGTTFKGRLFGANASVSGEVVFQTGMVGYPEALTDPSYRCQILTLTYPLQGNY GIPQDEEGDFGLSKWFESSKIHAAALIVGEVSQNPSHWSSAMSLDQWLKEQGIPGLEGVD TRSLTKKIREKGTMLGKLVVDGTLEANVPFDNPDQRNLVKEVSMKEPLVFNPSGTVRITA VDCGIKYNQIRCLCQRGACVTVVPWDHPLDSTDFDGLFISNGPGDPQFCKETIHNVRKVV CVDNPKPVFGICLGHQLLSLVIGAKTYKMKYGNRGHNQPCIHKGTDRCFITSQNHGFAVD PLTLPQGWDVLFTNANDQTSEGIVHNTKHLFSVQFHPEHMAGPTDLVSLFDVFLDTVRDH KEGKSGKPVKQRLTEHLTYPGSPKPEEFVRPRKVLILGSGGLSIGQAGEFDYSGSQAIKA LKQENIQTVLINPNIATVQTSKGLADKVYFLPLTPEYVTEVIKNERPDGVLLTFGGQTAL NCGVELTKRGVLEKYAVRVLGTPVASIEMTEDRKIFVEKMEEINEHVAPSEAALSVEQAV AAAERLGYPVLVRSAFALGGLGSGFANNSEELTSLVTSAFAHTSQVLVDKSLKGWKEIEY EVVRDAYDNCITVCNMENIDPLGIHTGESIVVAPSQTLNDYEYNMLRDTAIKVIRHLGIV GECNIQYALNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLGLGIPLPVLKNSV TNQTTANFEPSLDYCVVKVPRWDLSKFLRVSTKIGSSMKSVGEVMAIGRSFEEAFQKALR MVDENCVGFDHTIKPVSDEELQTPTDKRIFVLAAALRAGYTVDRLYDLTKIDRWFLHKMK NIADHEKVLESYNQDESAMPLEVMRKAKQLGFSDKQIALAVQSTELAMRKLRRDWSILPV VKQIDTVAAEWPAQTNYLYLTYNGTESDLGFSEPHVMVIGSGVYRIGSSVEFDWCAVGCI MELRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYEMENPEGVILSMGGQL PNNIAMSLHRQQCRILGTSPEFIDSAENRFKFSRMLDTIGISQPLWKELTAIESAMKFCE TVGYPCLVRPSYVLSGAAMNVAYTDSDLEKYLSSAVAVSKEYPVVISKFIQEAKEIDVDA VACDGVVMAIAVSEHVENAGVHSGDATLVTPAQDINQKTMERIKMIVHAIGLELQVTGPF NLQLIAKDDQLKVIECNVRVSRSFPFVSKTLGVDLVALATCVIMGEEVEPVGLMKGVGIV GVKVPQFSFSRLAGADVVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPKKNILLSI GSYKNKSELLPTVQAMESLGYDLYASLGTADFYTEHGVKVMAVDWPFEEEESDCPNKDKQ RNILEYLEDHHFDMVINLSMRNSGGRRLSSFVTKGYRTRRMAIDYSVPLIIDIKCTKLFF QALRLVGGFPPVKTHVDCMTSQKLIRLPGLIDVHVHLREPGATHKEDFSSGTAAALAGGV TMVCAMPNTAPAIIDLSSLTMVQKLAKAGCRCDYALYVGAASDNAAVLPSIANSAAGLKM YLNDTYSTLKMDNVSVWMEHFEKWPKHLPIVAHAEKQTVAAILMVAQLYQRAVHICHVAK KEEILIIRVAKQKGIQVTCEVAPHHLFLCEENVADIGDGRAQVRPMLGTREDMEALWEHM DIIDCFATDHAPHSVEEKNSEKPPPGYPGLETMLPLLLTAVSDGRLTVDDIIKRLYDNPR KIFSLPAQDNTYVEVDLEQEWVIPKHMQFTKSKWTPFEGMKVKGKVRRVVLRGEVAYIDG QVLVPPGYGEDVKTWPAPIPTQPPEPVKEVQQTPEHPRLTSPCEGIRTRAPSPRRSAGDG RYMLPPRIHRSSDPGVTPGFRTIHTKWRLDFVAEDSRERALRRAFEEDLKEEMAPAAGDG SSHPPPLARVLSPRAEAGLGVAAGQPQTLTHLQTSPLLHPLVGQHVLSVRQFSKEQISHL FNVAHTLRLMIQKERTLDILKGKVMASMFYEVSTRTSSSFAAAMQRLGGSVVHFCEATSS SQKGESLADSVQTMSCYADVLVLRHPMPGAVESAARHCRKPVINAGDGVGEHPTQALLDV FTIREELGTVNGMTITMVGDLKHGRTVHSLARLLTQYRITLRYVAPKNLHMPSEIIDFVA SKGIKQEEFESIEEALPDTDVLYITRIQKERFSSEEEYKACFGQFILTPHIMTGAKRKMV VMHPLPRVNEISAEVDTDPRAAYFRQAENGMYIRMALLATVMGR NT seq 6795 nt NT seq  +upstreamnt  +downstreamnt atggcaaccctgattttagaagatgggaccaccttcaagggacgccttttcggggcaaat gcgtcggtgtctggtgaagttgtgttccagacaggcatggtgggctacccagaggccctg actgacccgtcctacaggtgtcagattctcaccctcacctaccctctgcagggcaactat ggcataccccaggatgaggagggggactttggactcagcaagtggtttgagtcttctaag atccacgctgcagccctcatcgtcggggaggtctcccagaaccccagccactggagctca gccatgtctctggaccagtggctcaaagagcagggcatccccggcctagagggagttgac acccgcagtctgaccaagaagatccgtgagaagggaaccatgctggggaagcttgttgtg gacggaacgctggaggccaacgttccatttgacaaccctgaccagaggaacctggtcaag gaggtgtccatgaaggagcccctggtgttcaaccccagtggtactgtcaggatcacagca gtagactgtggcattaagtacaaccaaatccgctgcctgtgtcagagaggggcctgtgtc actgtggtgccctgggatcacccactggacagcacagattttgatgggctattcataagc aatggccctggggacccccagttctgtaaggagaccatacacaacgtgaggaaggtggtg tgtgtggataaccccaagcctgtgtttggtatctgcctgggccaccagcttctctccctt gtcatcggagcaaaaacctacaaaatgaagtatggaaatcgtggccataaccagccctgc atccacaagggcacggatcgctgtttcatcacgtctcagaaccatggctttgctgtggat cccctgaccctgccacagggctgggatgtgctcttcaccaatgccaatgaccagaccagt gagggcattgtgcacaacaccaaacacctattcagtgtccagttccacccagagcacatg gcaggccccactgacctggtcagtctatttgatgtgtttctggacactgttagagaccac aaggagggcaagagtggcaaaccagtgaagcagagactgacggagcacctgacctaccct gggtctcccaagccggaagagtttgttcggccacgcaaggtcctgatcctgggctctggg ggcctctccatcggacaggctggggagtttgattactctggctctcaggccataaaagca ttgaagcaggagaacattcagactgtgctcatcaaccccaacattgccacggttcagacc tccaagggactggctgacaaggtttacttcctacctctcaccccggagtacgtcactgag gtgataaagaatgagcgtccagacggggtcctcctgaccttcggggggcagactgctcta aattgcggggtggagctgaccaaaaggggtgtcctggagaagtatgcggtgcgtgtgctg gggacgccagtggcctccatcgagatgactgaggacaggaagatctttgtggagaagatg gaggagatcaatgagcacgtggcgcccagcgaggccgctctgtctgtggagcaggcggtg gcggctgcagagcgtctaggctaccctgtcctggtgcgctctgcctttgccctgggcgga ctgggctctggcttcgccaataacagtgaggagttgacctctctggtgacctctgccttc gcccacacctcccaggtcctagtggacaagtccctgaagggctggaaggagatcgagtat gaagtggtcagagacgcctacgacaactgtatcaccgtatgtaacatggagaacattgat cctctgggtatccacactggggagtcgatcgtggtggcgcccagtcagacgctcaacgac tatgagtacaacatgttgagggacaccgccatcaaggtcatcagacacctgggcatcgtg ggagagtgtaacatccagtatgccctcaacccggagtctgaacagtactacatcattgag gtgaatgcccgtctgtctcggagctcagctctggccagtaaagctacaggatatcccctg gcctacgtggctgccaagctgggattgggcatccctctacctgtcctcaagaactcggtg accaaccagaccacggctaactttgagcccagtctggactactgtgtggtgaaggtccct cgctgggatctcagcaagttcctccgtgtcagcaccaagataggtagctccatgaaaagc gtgggagaggtgatggccatcggccgcagctttgaggaagccttccagaaggctctacgg atggtggatgagaactgtgtgggctttgaccacaccatcaaaccagtgtctgacgaggag ctgcagactccgacagacaagcgtatatttgtgctggcggctgctctgagggcgggctac acagtggaccgcctgtacgacctgaccaagatcgaccgctggttcctccacaagatgaag aacattgcggaccatgagaaggtgctggagtcgtacaaccaggacgagagtgccatgcct ctggaggtgatgaggaaagccaagcagctgggcttctcagacaaacagatcgccttggct gtgcagagcacggagctggcaatgaggaagctgcgacgtgattggagcatcttgccggtg gtgaagcagatcgacactgttgcagcagagtggccagcccagaccaactacctgtacctg acctataacggtacagagagcgacctgggcttcagcgagccccatgtaatggtaatcggc tccggcgtttaccgcattggcagcagtgtggagtttgactggtgtgctgtgggctgcatc atggagctcaggaagatgggctataaaaccatcatggtgaactataacccagagactgtc agcacagactacgacatgtgcgaccgcctctacttcgatgagatctcctttgaggttgtt atggacatctatgagatggagaacccagagggagtgatcctgtccatggggggccagctg cccaacaacatcgccatgtccctccacaggcagcagtgtcgcatcctgggcacctccccg gagttcatcgactctgctgagaacaggttcaagttttcccgcatgctggacaccatcggc atcagccagcccctgtggaaggaactcacagcgattgagtcggccatgaagttctgtgag accgtgggctacccgtgtctggtgcgtccctcctacgttctgagcggagcagccatgaac gtggcgtacacagacagcgacctggagaagtacctgagcagcgctgtggccgtgtccaag gaataccctgtggtaatctccaagttcatccaggaggccaaggagatagatgtggacgcg gtggcatgtgacggtgtggtgatggccattgccgtgtcagagcatgtggagaacgctggg gtgcactctggggacgccaccctggtcacgcccgcccaggatatcaaccagaagaccatg gagcgcatcaagatgattgttcacgccatcggtctggagctgcaggtcaccgggcccttc aacctgcaactcatcgctaaggatgaccagctgaaggtgatcgagtgcaacgtccgagtc tcccgctccttcccgttcgtctcgaagacactgggagtggatctggtcgccctggcaaca tgtgtcatcatgggagaagaggtggagcctgtgggcctgatgaaaggagtgggcatcgtg ggtgtcaaggtcccccagttctcgttttctcgtctggccggggctgatgtggttctgggg gtagagatgaccagcactggggaggtggcctgctttggagagaacagatacgaggcctat ctgaaggccatgctgagcacaggcttcaagatccccaagaagaacattttgctctccatc ggcagttataagaacaagagtgagctactgcctactgtacaggctatggagagtctaggc tatgatttgtatgccagtctggggaccgctgacttctacactgagcatggagtcaaggtg atggcagtggactggccgtttgaggaagaggagagcgactgccccaacaaggacaagcag aggaacatattggaatacttggaggaccaccactttgacatggtcatcaacctctccatg aggaactctggaggccgacgcctctcctcctttgtaaccaaaggttaccgcacccgccgc atggccatcgactactcagtccccctcatcattgacatcaagtgcaccaagctatttttc caggcgctgcgtctggttggaggctttccgcccgtcaagactcacgtggactgtatgacg tcacagaagttgattcgcttgcctggtctgatagatgtgcacgtccacctgcgggagccg ggtgccactcacaaggaggacttctcctcgggcacagcggctgccttagcagggggagtc accatggtgtgtgccatgcccaacacggcacccgccatcattgacctcagctctctcacc atggtccagaagcttgccaaggcagggtgtcgctgtgactatgccctctatgtcggggcg gcttcagacaatgctgccgtcttaccctccatcgccaactccgccgctgggctgaagatg tatctgaacgacacctactccactctgaagatggacaatgtctcagtttggatggagcac tttgagaaatggcccaagcacctaccaatcgtggctcacgcagagaagcagacggtggca gccatcttgatggtggcccagctctaccagagagctgttcatatctgccacgtggccaag aaggaggagattctgatcatccgtgtggccaagcagaaaggcatccaggtgacgtgtgag gtggcgccccatcacctcttcctgtgtgaggagaacgtggcggacatcggggacggccgg gcgcaggtacgccccatgctgggaacccgggaggacatggaggccctctgggaacacatg gacatcattgactgcttcgcaaccgaccacgccccccattcagtggaggagaagaactct gagaagccccccccaggctaccctggcctggagaccatgctgcccctcctcctcaccgcc gtcagcgacgggcgcctcaccgtcgacgatatcatcaagcgcttgtacgacaacccccgc aagatcttctccctgcccgcacaggacaacacttatgtagaggtggacctggagcaggag tgggtcatacccaaacacatgcagttcaccaagtccaagtggacgcctttcgaaggcatg aaggtgaagggcaaggtccgcagagtggttctcagaggagaggtggcctacatcgacgga caggtgctggtccctcctggttatggagaggatgtgaagacttggcctgcacccatcccc acccagccccctgagccggtgaaagaagtccaacagaccccagagcacccccggctgacc tcgccgtgtgagggcatccgcacccgcgccccgagccctcgccgctccgctggggatgga cgctacatgctcccaccccgtatccacaggtcatctgacccaggcgttacaccaggtttt aggacaatacacacaaaatggcgcttggatttcgttgctgaagattcaagggaaagagca ttaagaagagcatttgaagaagatttaaaagaagagatggcccctgcagctggggatggc tccagccatccccctcccctggccagggtcctgtccccccgggctgaggcagggttgggg gtagcggcagggcagccccagaccctgacccaccttcagacctcccccctactgcacccc ctagtgggacaacacgtcctctctgtcaggcagttcagcaaggaacagatttctcacttg tttaacgtggcccatactcttcgcctgatgattcagaaagagagaaccctggacatcctg aagggtaaggtgatggcgtccatgttctacgaggtcagcacgcgcaccagcagctcgttt gcggcagccatgcagcgtctgggcggctctgtggtccatttctgcgaggccacctcctcg tcgcagaagggtgaatctctggccgactcggtccagaccatgagctgctatgctgacgtc ctggtgctccgacaccccatgccaggggctgtagagtctgcagcgaggcattgtcggaag ccagtgatcaacgctggggacggggtcggggagcaccccactcaggccctgctggatgtg tttaccatcagagaggagctgggcacggtcaacggcatgacgatcaccatggtaggagac ctgaagcacggacgcactgtgcattccctggccaggctgctcacccagtacaggatcact ctgcgctacgtcgccccaaagaacctgcacatgccctccgagatcatcgactttgtggcc tccaaaggcatcaagcaggaagagtttgagagcatcgaggaggcactgcctgacactgac gtgctctacattaccaggatccagaaggagaggttttcatcagaggaagagtacaaagcg tgcttcggtcagttcatccttaccccacacatcatgactggagccaagaggaagatggtg gtgatgcatcctctaccgagagtcaatgagatcagtgcggaagtggacacagatcctcgt gctgcctacttccggcaggctgagaacggcatgtacatccgcatggccctcctggccaca gtgatgggtagatga

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