Salvelinus namaycush (lake trout): 120024464
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Entry
120024464 CDS
T07522
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120024464
04082 Neuroactive ligand signaling
120024464
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120024464
Ion channels [BR:
snh04040
]
Ligand-gated channels
GABA-A
120024464
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Gene cluster
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120024464
NCBI-ProteinID:
XP_038824642
UniProt:
A0A8U0PGX9
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Position
Sna29:25662436..25690312
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AA seq
474 aa
AA seq
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MPYYIKFLFLIFCLILIGECRKHKSRKRRWSGAVESHKHGAPLTGKKIVDNTKSHKVKTD
HLLRVDDHDFTMRPAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFP
STTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMLRVFPDGHVLYSLRVTVTA
ACNMDFSRFPLDSQTCTLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTT
SRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSL
GITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVRDGKD
RKLREKAREQSLPCTCGMSHTGTGMVDGDGTYSEADTNSLAGYTRADAPEDTPEKQEHMV
VHLSLDNESTGTKKKARFRSFSLMQNTHAIDTYSRMIFPGSYIIFNLIYWSAYC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgccttattatattaagttcctgtttttaattttttgcttgatacttatcggagaatgc
cgaaagcacaaaagtaggaaaaggaggtggtccggggcggtagaatctcacaagcatggc
gctccactgactggaaaaaagatagttgataacaccaaatctcacaaggtgaagacagac
cacctgctgcgagttgatgaccatgattttaccatgagaccagcctttgcaggccctgct
gtccctgtgggagtggatgttcaggtggagagtttggacagtatatcagaagtggacatg
gacttcactatgaccctgtatctgaggcactactggaaagacgagaggctgtcctttccc
agcacaaccaataagagcatgacgttcgacgggcgcctggtcaagaagatctgggtgcct
gatgtgttcttcgtccactccaagaggtcgttcatccacgacaccaccacagagaacatc
atgctcagggtgttcccagatggacacgtgctctacagccttagggtgacggttactgct
gcctgtaacatggacttcagtcgtttccctctggattcacagacctgcacattagagcta
gagagctatgcttacacggatgaggacctcatgctgtactggaagagtggggatgagtcc
ctgagcacggacgacaggatctctctgtctcagttcctcatccagaagtttcacactacc
tctagactggctttttacagcagcacaggctggtacaaccgtctgtacatcaacttcacc
ctgcgacgccacatcttcttcttcctgctgcagacctacttccctgccactctgatggtc
atgttgtcctgggtgtccttttggatcgaccgccgggccgtaccggccagggtctcacta
ggtatcaccacggtgctcaccatgtccaccatcatcactggagtcaacgcctccatgccc
agggtttcctacatcaaagctgtggacatttacctctgggtcagttttgtgtttgtgttc
ctatcggtgttggaatatgccgccgtcaactacttgacgacggtgagggacggaaaagat
cggaagcttagggaaaaggccagagagcagtcactcccctgcacctgtggcatgtcccac
accgggaccgggatggtggatggcgacgggacctacagcgaggccgacaccaacagcctg
gccggatacaccagggctgacgctcccgaggacaccccagagaagcaagagcacatggtg
gtgcacctatccctggacaatgagtccacgggaaccaagaagaaagcgcgcttccgcagc
ttcagcctcatgcagaacacccacgccatagacacctactcccgcatgatctttccagga
tcctacattatctttaacctcatatactggtctgcatactgctga
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