Salvelinus namaycush (lake trout): 120024499 Help Entry 120024499         CDS       T07522                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism snh  Salvelinus namaycush (lake trout) Pathway snh04115   p53 signaling pathway snh04145   Phagosome snh04148   Efferocytosis snh04350   TGF-beta signaling pathway snh04510   Focal adhesion snh04512   ECM-receptor interaction snh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:snh00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     120024499   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120024499  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     120024499    04148 Efferocytosis     120024499   09143 Cell growth and death    04115 p53 signaling pathway     120024499   09144 Cellular community - eukaryotes    04510 Focal adhesion     120024499   09142 Cell motility    04820 Cytoskeleton in muscle cells     120024499  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:snh04131]     120024499   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:snh00536]     120024499 Membrane trafficking [BR:snh04131]  Endocytosis   Phagocytosis    Opsonins     120024499 Glycosaminoglycan binding proteins [BR:snh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120024499 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_ADAMTS Laminin_G_3 TSP1_CCN EGF cEGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  120024499 NCBI-ProteinID:  XP_038824687 UniProt:  A0A8U0PH04 LinkDB All DBs Position Sna29:34910979..34933257 Genome browser AA seq 1172 aa AA seqDB search MKLTGIFLLLMLWTCESVRVAESRDDNSVYDLFELVQIPKKNHGVTLVKGDDPYSPAYKI LNPDLIPEVPESSFRDLIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKRDGSGAVFEIVS NGKANTLDVVFSTVNKQQVVSIEDVDLATGHWKNITLFVQEDRAQLYVGCEEVNTAELDA PIQSILTQETPITARLRIGKGAVKDRFMGVLQNVRFVFGTSLEAILRNKGCQNSVLTDRI LIMDNPINGSSPAIRTDYTGHKTKDLQMICGFSCEDLAGMFKELKGLGVVVKELSNELRK VTDENKLLMNRVGIHSGVCLHNGIVHKNKAEWTVDDCTECTCQNSATVCRKISCPLIPCA NATVSDGECCPRCGTLSDYAEDGWSLWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSV QTRDCYLQECDKRFKQDGAWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKDCQGEG RQTEKCTKSPCPINGNWGPWSLWDTCSSTCGGGAQTRKRLCNDPAPKYGGKECQGDSKAT QLCNKNACPVDGCLSNPCFPGAKCTSFPDGTWSCGKCPTGYSGDGIKCKDIDECKEVPDA CFVFNGVHRCENTDPGYNCLPCPARYSGPQPFGRGVEEAAAKKQVCTPRNPCLDGSHDCN KNARCNYLGHFADPMYRCECKPGYAGNGHICGEDTDLDGWPNQDLVCVENATYHCKKDNC PNLPNSGQEDYDKDGVGDACDNDDDNDAILDDRDNCPFVYNPRQYDYDRDDVGDLCDNCP YNSNPDQTDTDNNGEGDACSVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPL EHNPDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDEKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNVPDIYDVCPENFDISETDFR KFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSMDFSGTFFINTER DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGNTPGQVRTLWHDPKKVGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMKDSGSI YDKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagttgacaggaatatttctgctattgatgctttggacctgcgagagcgtacgagtt gcagagagccgagacgacaatagcgtgtacgacctgttcgagctggtccaaatccccaag aagaaccacggagtgaccctagtgaagggcgacgacccatacagtcccgcctacaagatc ctcaacccggacctgatccccgaggtccccgagagctccttcagggacctcattgattcc atccacgccgagaggggattccttctcctcctcaacttcaagcagttcaagcggaccagg ggctcccttctgacggtggaaaagcgggacggttccggagccgtgttcgagatcgtctcc aacgggaaagcgaacaccctggatgtggttttctccaccgttaataagcaacaggtggtg tcgatagaagatgtggacttggcaacgggccactggaagaatattacgctgtttgtgcag gaggaccgggcgcagctgtatgttggctgtgaggaggtgaacacggcggaactggacgct cccatccagagcatcctcactcaggagactcccatcacagcgcgtctcagaatcgggaag ggagcggtgaaggaccggttcatgggggtgctccaaaacgttcgctttgtctttggaacc agtttagaagcgatactgcgcaacaaaggatgccaaaactctgttctgactgatagaatc ctcattatggacaaccccatcaatgggtccagccctgccattaggactgactacactggc cacaaaactaaagacctgcagatgatctgtgggttctcctgtgaggacctggctggcatg ttcaaggagctgaaggggttgggagtggtggtgaaggagctgtctaacgagctgcgcaaa gtgacggatgagaacaagctgttgatgaacagagtggggatccacagtggagtctgtctg cacaacggcatcgtccacaagaacaaggccgagtggaccgtcgacgactgtaccgagtgc acttgtcagaactctgccacagtatgccgcaagatctcctgcccgctgatcccctgtgcc aacgccaccgtgtccgatggagagtgttgtccgcgctgtggaacactgagtgactatgcg gaggacggctggtccctctggtctgaatggacacactgttccgtgtcttgtgggcggggc atccagcagagaggccgctcctgcgatcgcattaacaacaactgcgaaggaacctccgtc caaaccagggactgctaccttcaggagtgtgacaaacgcttcaagcaggacggtgcctgg agccactggtccccctggtcttcctgctcggtcacctgtggggcgggtgtcatcacccgt atccgtctctgcaactcccccacaccccagctgggaggcaaggactgccaaggagaggga agacagactgagaagtgcaccaagtcaccctgccccatcaacggtaactggggaccctgg tcgctatgggatacctgctcttccacctgtggaggaggagcccagacacgtaaacgtctc tgcaatgaccccgcccccaaatatggtggtaaggagtgccagggtgactccaaggccact cagctgtgcaacaagaacgcctgtcccgtcgatggctgtctgtctaacccctgctttcct ggggccaagtgcaccagctttcccgatggaacatggagttgtgggaaatgtcccactggt tactctggtgacggcatcaagtgcaaggacattgacgagtgcaaagaggttcctgacgct tgcttcgtgttcaacggagtgcaccgctgtgagaacactgaccctggctacaactgtctg ccctgtcccgcacgctactctggacctcagcccttcggcaggggagtggaggaggctgcc gccaagaaacaggtgtgtacaccacgtaacccctgcttggatgggagccacgactgcaac aagaacgcccgctgtaactacctgggacactttgccgaccccatgtaccgctgtgagtgt aagcctggctatgctgggaacggacacatctgtggtgaggacacggacctggacggatgg cccaaccaagacctggtctgtgtggagaacgccacctaccactgcaaaaaggacaactgc cccaaccttcccaactcaggccaagaagactacgacaaggatggtgttggtgacgcttgt gacaacgatgatgacaatgatgccattcttgacgacagggataactgtccgtttgtgtac aaccccaggcaatatgactatgacagagatgatgttggagatctttgtgataactgtcct tacaacagcaaccctgaccagaccgacacagacaacaacggggaaggagacgcctgctct gtggacattgatggagatggtattctgaatgagaaagataactgcccgtacgtctacaac gtggaccagcgagacactgacctggacggtgtgggagacatgtgtgacaactgtcctctg gaacacaaccctgaccaggttgactctgatgacgaccgtgtgggagacaagtgtgacagc aaccaggacatcgatgaggacggccaccagaataacctggacaactgcccctacatcccc aacgctaaccaggccgaccatgacaaagacggcaagggagacgcctgcgaccacgatgat gacaacgacgggatccctgatgagaaagacaactgcagactggccttcaaccctgaccag ctcgactctgatggtgatggtcgcggagatgtttgcaaagacgacttcgaccaagacaac gtccctgacatctacgacgtgtgtccggagaactttgacatcagcgagacggacttcagg aagttccagatggttcccctggaccccaagggaacttcccagatcgatcccaactgggtg gtcagacatcaaggcaaagagctggtccagaccgtcaactgtgaccctggcattgctgtt ggttttgatgagttcaactccatggacttcagtggaaccttcttcatcaatacagagaga gatgatgactacgccggctttgtgttcggctaccagtccagctctaggttctacgtggtg atgtggaagcagatcacacagacttactggagcaacaaacccaccaaggctcagggatac tcaggactgtccatcaaggtggtcaactctactactggacctggagagcacctcaggaat gctctctggcacacgggcaacaccccaggacaggtgaggactctgtggcacgaccctaag aaagttggctggaaagacttcacagcctacagatggcacctgatccacagaccaagaaca ggacacatcagagtggtcatgtacgaggggaagaagatcatgaaggattctgggagcata tacgacaagacgtatgcaggcggaagactaggtctctttgtcttctcgcaagagatggta tacttctcagacctcaagtatgaatgcagagatgcataa

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