KEGG   Salvelinus namaycush (lake trout): 120024537
Entry
120024537         CDS       T07522                                 
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120024537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:snh03041]
    120024537
Spliceosome [BR:snh03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120024537
 Complex B
    120024537
 Complex C
   U2 SnRNP specific factors
    120024537
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 120024537
NCBI-ProteinID: XP_038824743
UniProt: A0A8U0PGK1
LinkDB
Position
Sna29:complement(7800347..7806724)
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRTGNTPESRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggctatgcaagcagctaaacgagctaatattcgattaccacctgaagtcaacagaata
ctctacattagaaatctaccatacaagatcacagctgaagaaatgtacgacatctttggg
aagtatggaccaatacgacagattcgaactggaaacacaccggaatcaagagggacagct
tacgtggtctacgaggacatctttgatgccaagaacgcctgcgatcacctgtctggattt
aacgtctgtaacagatatcttgtagttttatactacaatgcaaacagggcgttccagaag
atggacacaaagaagaaagaggagcagctgaagcttctgaaggagaaatacggcatcaac
acagatcccccaaaatag

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