Salvelinus namaycush (lake trout): 120024894
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Entry
120024894 CDS
T07522
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120024894
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
snh01007
]
120024894
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snh03016
]
120024894
Enzymes [BR:
snh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
120024894
Amino acid related enzymes [BR:
snh01007
]
Aminoacyl-tRNA synthetase
Class I (G)
120024894
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120024894
Prokaryotic type
120024894
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
120024894
NCBI-ProteinID:
XP_038825173
UniProt:
A0A8U0PIH7
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Position
Sna30:1041419..1073142
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AA seq
748 aa
AA seq
DB search
MVSKQDISTDRRGKRVQPPWSAPAGSNLPKLRLYNSLTRTKELFVPQNGNKVSWYCCGPT
VYDASHMGHARSYISFDILRRILMNYFKYDVFYCMNITDIDDKIIRRARQNYLLEQYREK
KPAAAQILQDVLSARGPFQAKLAETTDPDKKQMLERLDSAVAAALGPLQGAVESKAGEAD
IQRLAQVLLEKAKDLLSDWLDAQFGSQVTENSIFSLLPKFWEGEYHNDMDALNVLPPDVL
TRVSEYCPEIVDFVKKILDNGFGYESNGSVYFDTAKFDTSQKHAYGKLVPEAVGDMKALQ
EGEGDLSVSADQLSEKRSQNDFALWKASKPGEPSWDSPWGKGRPGWHIECSAMAGSILGE
SMDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHTGHLTIAGCKMSKSLKNFITIK
DALAKNTARQLRLAFLMHSWKDTLDYSSNTMESAVHYEKFLNEFFLNVKDILRAPCDITG
QFEKWEAAEMELNESFYERKAAVHEALCDNVDTRCTMEEMRALVTQSNTYIASRKRSKLQ
PNRMLMKSIALYLTDMLKTFGAIEGSEPIGFPVGGDGHHVDMETTVMPYLKVLSDFRESV
RKIAREQNVTEVLQLCDVVRNDTLPELGVRLEDHEGLPTVVKLVDKETLLRERNEKKKME
DEKKNKKEEAAKKKQEQELAKLAKMKISPCDMFRSETDKYSGFDETGFPTRDVEGKDLSK
GQTKKLRKLYEVQEKLHQEYLQTNQNGC
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggtctccaagcaagatatcagcacagacagaaggggaaagagggtccagcccccctgg
tctgccccagccgggtccaacctgccaaagctgcgactctacaacagcctcacacgcacc
aaggagttgtttgttccccagaatggaaacaaggtgtcgtggtactgctgcggacccact
gtctatgatgcctctcacatgggacatgccagatcttacatatcttttgatatcctccga
aggattctgatgaactatttcaaatatgacgtgttctactgtatgaacattactgacata
gatgacaagatcatcaggcgggccagacagaactacctcctggaacagtacagggagaag
aagccagcggctgcccagatactacaggatgtccttagtgccagagggcccttccaggcc
aagctggccgagaccacagacccagacaagaaacagatgctggagaggctggactctgcc
gtcgctgctgccctgggacccctgcagggggcggtggagagcaaggctggggaggctgac
atacaacgcctggctcaggtgttactggagaaggccaaagacctgctgtctgattggttg
gatgctcaatttggcagtcaagtgaccgagaactccatcttctctcttcttccaaagttc
tgggaaggggagtaccacaacgacatggacgccttgaatgtccttcccccggacgtactc
acccgcgtcagcgagtactgcccagagatcgtggactttgtgaagaagatcctagacaat
ggcttcgggtacgagtccaacggttcagtttattttgacacagccaagtttgacaccagc
cagaagcacgcgtacggcaagctggtacctgaagcggtcggtgacatgaaagctctgcag
gagggagagggagatctgagtgtctcagcagaccagctcagtgagaagaggtcgcagaat
gactttgccctgtggaaggcctctaagccgggggagccgtcctgggactcaccctgggga
aagggacggcctggctggcatatcgaatgttccgctatggctggttccatcttgggagag
tccatggacatccacggaggagggtttgacctccgattcccccatcacgataatgagttg
gctcagtccgaggcttactttgagaatgaccactgggttcgctacttcctgcacactggt
cacctgaccatcgcaggctgcaagatgtccaaatctctcaagaacttcatcaccatcaag
gatgccctggcaaagaacacagctcggcagctccgtctagccttcctgatgcattcctgg
aaggacaccctggattactcctccaacaccatggagtcagctgtccactacgagaaattc
ctgaatgagtttttcctcaacgtcaaagacattctccgagctccctgtgacatcaccgga
cagtttgagaagtgggaggcagcggagatggagctcaacgagagtttctatgagaggaag
gcagcagtccacgaggcgctgtgtgacaacgtggacacgcgctgcaccatggaggagatg
agggcgctggtgacccagagcaacacctacatagccagtaggaagaggtccaagctgcag
cccaaccgcatgctgatgaagagcatcgctctctacctgactgacatgctcaagaccttt
ggggccattgaagggtccgagcctattggattcccagtgggaggagatggtcaccatgtg
gatatggagaccacagtgatgccctatctgaaggtgctgtcagacttcagagaatctgtt
cgcaaaatcgccagagaacagaatgtgacagaggtgctacagctgtgtgacgtggtccgt
aatgacaccttacctgagctgggggtgcgtctagaagaccatgaaggtcttcccactgtg
gtgaagctggtggataaagagaccctgctgagggagaggaatgagaaaaagaagatggag
gacgagaagaagaacaagaaagaggaggctgccaagaagaagcaggagcaggagttggcc
aaacttgcaaagatgaaaatctccccatgcgatatgttccgctctgaaaccgacaagtat
tccggctttgatgaaacgggtttccccacgcgtgatgtggaggggaaggatctcagtaag
ggacagaccaagaagctgcggaaactctacgaggtccaggagaaactgcaccaagagtat
ctccagaccaatcagaatggctgctga
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