Salvelinus namaycush (lake trout): 120025130
Help
Entry
120025130 CDS
T07522
Name
(RefSeq) src substrate cortactin-like isoform X1
KO
K06106
cortactin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120025130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120025130
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120025130
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
120025130
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
120025130
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
120025130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HS1_rep
SH3_1
SH3_9
SH3_2
TMEM210
Motif
Other DBs
NCBI-GeneID:
120025130
NCBI-ProteinID:
XP_038825498
UniProt:
A0A8U0TRL0
LinkDB
All DBs
Position
Sna30:complement(30113008..30130765)
Genome browser
AA seq
513 aa
AA seq
DB search
MWKAAAGQSVTVAVDDGGDDWETDPDFENDVSEKEQRWGAKTVEGSGHQEHINIHKLREN
VSSEHSDLRQKEQATMPKASDGYGGKFGVQQDRMDKSAVGHEYQSKLSKHCSQTDTSKGF
GGKFGVQGDRVDKSAVGFDYAGKTEKHASQKDYSTGFGGKYGVQADRVDKTAMGFEYQGK
TEKHDSQKDYTKGFGGKFGVETDKVDKSALGFEYQGKTEKHESQKDYVKGFGGKFGVQTD
RQDKSALGWDHQEKLQLHESQKDYSHGFGGKFGIQKDRMDKSAGNFEDVEKPSPAYQRTK
PVEAAGSSTGSIKARFENIAKQKEDEDKKRAEEERARRQAKEKQEQEEARRKIEETAKAK
PASPSPERSLTISPTPPVQKAAPLPVPAAADPVYQDTGVYEDPAAEENGEELYEAEPTSR
PSSEQTYEEPPVQEAALYQSPDDTGDAQTYEYGEDLGVTAVALYDYQAAGDDEISFDPDD
IITNIETIDEGWWRGVCRGAYGLFPANYVELRQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaggcagcagcaggtcagtccgtcaccgtggcggtggatgatggaggtgatgac
tgggagacagacccagactttgagaatgacgtttcggagaaggaacagcggtggggggcc
aagacggtggaaggctccggtcaccaggaacacattaatatccacaagctgcgtgagaac
gtgtcatcggagcacagtgacctgaggcagaaggagcaggccaccatgcccaaggcctcg
gatggctatgggggcaagtttggggtgcagcaggaccgcatggacaaatctgcggtgggc
catgagtaccagagtaagctgtccaagcactgctctcagacagacacatccaaaggcttc
ggggggaagtttggagtgcagggcgaccgcgtcgacaagtccgctgtcgggtttgactat
gccgggaagactgagaaacacgcatcgcagaaagactactccacagggtttggggggaaa
tatggggtgcaggcagaccgcgtggacaagactgcaatgggctttgaataccagggcaaa
acggagaaacacgactcccagaaagattacaccaaaggttttggtgggaagttcggagtg
gagacggacaaggtggacaagagcgccttgggctttgagtaccagggcaaaaccgagaag
cacgagtctcagaaagattacgtgaagggctttggtggcaagtttggtgtgcagacggac
agacaggacaagtcggccctgggatgggaccaccaggagaaactgcagctccacgagtca
cagaaagactactcccatgggttcggagggaagtttggcatccagaaggaccgaatggat
aagagtgcaggtaactttgaggatgtggagaaaccaagccctgcctaccagaggaccaag
cctgtggaagctgctggcagcagcacaggcagcatcaaggcccgctttgagaacatcgcc
aagcagaaggaggatgaggacaagaagcgggcggaggaggagagagctcgccgccaggcc
aaggagaagcaggagcaagaggaggcgcggcgcaagatagaggagacagccaaggccaag
cctgcctccccgtctcccgagcgaagccttaccattagccccacccctcctgtccagaaa
gccgcacctttgcctgtacctgcagccgccgacccagtttaccaggacactggtgtgtac
gaggatcctgcagcagaagagaatggagaggagctgtacgaggcggagcccacctcccgt
ccctcttccgagcagacgtatgaggagcctcccgtccaggaggcggcgctctaccagagt
cctgacgacacaggagacgcccagacatatgagtacggtgaggacttgggggtaacggca
gtagccctgtatgactaccaagcagctggtgatgacgagatctccttcgaccctgatgac
atcatcactaacattgagactattgacgagggctggtggaggggcgtgtgccggggtgcc
tacggcctcttcccagccaattacgttgagcttcggcaatga
DBGET
integrated database retrieval system
