Salvelinus namaycush (lake trout): 120027128
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Entry
120027128 CDS
T07522
Name
(RefSeq) DNA-binding protein RFX5-like isoform X1
KO
K08061
regulatory factor X 5
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120027128
Transcription factors [BR:
snh03000
]
Eukaryotic type
Other basic domains
RF-X
120027128
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Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Motif
Other DBs
NCBI-GeneID:
120027128
NCBI-ProteinID:
XP_038827901
UniProt:
A0A8U0PNW1
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Position
Sna32:complement(10559110..10569979)
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AA seq
679 aa
AA seq
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MLSELNSTKHCLCSTPLVELIRNFLHHGVEFSQLHCTLPTHISTTIIIVRGLRVRLPPLC
EQTMTEDRLKADPSKREGLDSGEGDTEPSLLLQKLKSNISENIQGKVDVILQDVQRFSDN
DKLYLYLQLPSGPSSGEKSLAMAPLAQLRRWCISASMSALEDRTLPSSSSSDPSSFNTAD
QLHTCNWIRSHLEEHIDTCLPKQDVYETYKRYCENLQHRPLSAANFGKTIRDIFPNIKAR
RLGGRGQSKYCYSGIRRKTVLNMPLLPNLDLKNDPSELTELVQTYKQEVTEAACELICDW
AQKILKRSFDTVVEIARFLVQEHIVNPRCSQAELVTSAAMAGGPAKPHKVIKKNPVPSKG
GGPETEGSSSDAKRDKEVGDQSSPGTLQSSDKPTKGAESVRPGGRDLQVEALMKHLPRIL
PRSSVPEKSQGGALPIMILPHTVSLSYPEKAPPVTMAPVAPSSVVQRARAVTKRALEAPT
ATSGGPGPGGTPGKRKRGRPRKPRPEDTTSPQPPPPSLPSVNQAPIMKSLTGGVIQKACS
SSSSSQVVEVVFQDQHAVVLGQLHSVADSGNPEHRGVVLETDPRPLLLLPGTSHTNWDVG
RAMVEVIQRAPRPPTTKNNNNSQSTPQHRLPLPTLLEDRGQVEITLTPTEPSEDLPTPTT
QASSEGRPAPDDSTKVERP
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcggagctgaattccacaaagcattgtctctgctccacaccgttggtggaactt
atcagaaacttccttcaccatggagttgagtttagtcagctacattgcaccctgccaact
catatcagtactaccatcatcatagtcagaggcctcagggtgcgtttgccaccgctgtgt
gagcaaacaatgacggaggacaggttgaaggcagacccctccaagcgggagggtctggac
tcaggagagggagacacagagcctagcctgctgctgcagaaactaaagagcaacatctct
gagaatatacagggaaaagtggacgttatcttgcaagatgtgcagcgcttctctgacaac
gacaaactctacctttacctccagctgccttctggccccagttcaggggagaaaagtctg
gcaatggccccgctggcacaacttaggcggtggtgtatttctgcatcgatgtcagctttg
gaggacagaacactgccaagcagcagcagcagtgaccccagctccttcaacacagctgac
cagctgcacacctgcaactggatccgtagccacctggaggagcacatagacacctgcctg
cccaagcaagacgtgtacgagacatacaagagatactgtgaaaacctgcagcaccggcct
ctgagtgctgccaactttgggaagaccatccgtgacatcttccccaacatcaaagcccgg
aggctcggtggcaggggacagtccaagtattgttatagtggaatccgtaggaagacagtg
ctaaacatgccactgttgccaaacctggacctgaaaaatgacccatcggagctgacggag
ctggtgcagacctacaagcaagaggtgacggaggcggcttgtgagctcatctgtgattgg
gcccagaagatcctcaaacgttcctttgacacagtggtcgagatcgcccgttttcttgtg
caggagcacatcgtcaacccacgctgcagccaggctgaactcgtcacttctgccgcaatg
gcaggaggacctgcaaagccccacaaggtgatcaagaagaatccagtaccgtcaaaagga
ggtgggccggagacagaagggagcagctctgatgctaagagggataaagaagttggggat
cagtcgtcgccagggacactgcagtccagtgacaagccaaccaaaggggcggagtcagta
cgcccggggggtcgtgacctgcaggtggaggctctgatgaagcacctgccccgaatcctg
cctcgcagctccgtcccggaaaagtcccaaggcggcgctctccccatcatgatcctcccc
cacaccgtcagcctatcctaccccgaaaaagccccgccggttaccatggcgcctgtggca
ccgtcgtcggtggtgcagagggcccgtgccgtgaccaaacgggccctcgaggctccgact
gcaaccagcgggggccccgggccgggaggcacgccgggcaagcggaaacgaggacgaccc
aggaagccacggccagaggacaccacctctccgcaaccgccccctccgtccctaccttcg
gtcaaccaagcccccatcatgaagtccctcaccggaggggtgatccagaaagcctgctcg
tcctcctcctcttcccaggtggtggaggtcgtgttccaggaccagcatgccgtggtgctc
ggccagctacattcggtagcggactctggcaacccagagcaccggggtgtggtgctcgag
actgacccacggcccctgctgctgctgccagggaccagccacacaaactgggacgtgggc
agggccatggtagaggtcatccagagggcaccgagaccccccaccaccaagaacaacaac
aactcccagtctaccccccagcaccgcctgcccctgcccactttgctggaggatcgaggt
caggtggagatcaccctcactcccacggagccttcggaagatctgccgacccccaccacc
caggctagctcggagggccgccctgcgcctgatgacagcactaaggttgaaagaccctag
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