Salvelinus namaycush (lake trout): 120029574
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Entry
120029574 CDS
T07522
Name
(RefSeq) vacuolar fusion protein CCZ1 homolog isoform X1
KO
K27045
vacuolar fusion protein CCZ1, animal type
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120029574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120029574
Membrane trafficking [BR:
snh04131
]
Endosome - Lysosome transport
Others
Others
120029574
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Gene cluster
GFIT
Motif
Pfam:
Intu_longin_1
Intu_longin_3
Intu_longin_2
DUF8148
TSLP
Motif
Other DBs
NCBI-GeneID:
120029574
NCBI-ProteinID:
XP_038830774
UniProt:
A0A8U0TX26
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Position
Sna35:complement(19247305..19264891)
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AA seq
480 aa
AA seq
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MLMISPRMASGMQEKQYTPSLLSFFVYNPSFGSREGEEEKKILFYHPSEVEKNEKIRNVG
LCEAIVQFTRTFCPTKPAKSLHTQKNRQFFFEAEDSFWIVMVVRNPMVEKPNKDGRPPTI
EYQEEEILDTVYGAVLRECYSMYKLFNGTFGRAMEAGGVELLMQKLDKFFYRYLQTLHLQ
SCDLLDVFGGIAFFPLDKMTYLKIQSFVNRVEESLSLIKYTAFLYNDQLIWSGLEQDDMR
ILYKYLTTSLFPRHSEPELAGRDSPLRPEVAGNLLHYGRFLTGPANLKDPEAKFRFPRIF
VNTEDSYEELHLIVYKAMSAAVCFMISASVELTREFCEQLDGLVGPQLTLLASDICEQYN
VNRRISGPDKEPQFKFIYFNHMNLAEKSTIHMRKTASVSLTSVHPDLMKILGDINCDFAR
VDEDEEIIVKAMTDYWVVGKKSDQRELYVILNQKNANLIEVNEEVKRLCATQFNNIFFLD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgatcagtccgagaatggcttcgggaatgcaagagaaacagtacaccccatct
cttctcagttttttcgtctataatccttcatttgggtcacgggagggagaggaggagaag
aagattttattctaccatcccagtgaggtcgagaagaatgagaagatccgtaatgtcggt
ctttgtgaggccattgtacagtttaccagaaccttctgtccaacaaagcctgctaaatcc
ctacacacacagaagaacaggcagttcttctttgaagcagaggacagtttctggatcgtt
atggtggtgcggaacccgatggtagaaaaaccgaataaagatgggagacctcccacgata
gaatatcaggaagaggaaatacttgacacagtttatggtgcagtattacgggaatgctac
agtatgtacaagctcttcaacggcacatttggcagagcaatggaagcaggcggggtggag
ctgctcatgcagaagcttgacaagttcttttacaggtacctgcagacgctgcacctgcag
tcctgtgacctgctggacgtgttcggtgggattgcctttttccccctggacaagatgacc
tacctgaagatccagtcatttgtcaacagagtggaggagagcctcagcctgatcaaatac
acagccttcctctacaacgaccagctgatatggagtggtctggagcaggatgacatgcgg
atcctgtataagtacctgacaacgtcactgttccccagacactctgaaccagagctggct
ggtagggactctcccttaaggccagaggtggcagggaatctgcttcactatgggaggttt
ttgacaggacctgctaatctcaaagacccagaggccaaattccggttccctagaatattt
gtcaacacagaggacagttatgaggagctgcatctgatagtttataaggcgatgagtgca
gcggtttgttttatgatcagtgcatctgtggagctgacgagggagttctgtgagcagctg
gatggtctggtgggacctcagctcaccctgctggcctccgacatctgtgaacaatataat
gtcaaccgcaggatatcagggccggacaaggagccccagttcaagttcatctacttcaac
cacatgaacctggcagagaagagcaccatccacatgaggaagacagccagtgtctctctg
acttcggtccacccagacctcatgaagattctgggagacatcaactgtgacttcgccagg
gtcgatgaagatgaagagatcattgtgaaggctatgacagactactgggtggtcggcaag
aagtcggaccagagagaactctacgttatattgaaccagaagaatgccaatttgattgaa
gttaatgaggaagtgaagaggctctgtgcgacacagttcaacaacattttcttcttggac
tga
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