Salvelinus namaycush (lake trout): 120031615
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Entry
120031615 CDS
T07522
Name
(RefSeq) PHD finger protein 1-like
KO
K11467
PHD finger protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120031615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120031615
03036 Chromosome and associated proteins [BR:
snh03036
]
120031615
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120031615
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
120031615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
Chromo
ASH2L-like_WH
DUF4537
Motif
Other DBs
NCBI-GeneID:
120031615
NCBI-ProteinID:
XP_038833348
UniProt:
A0A8U0PYT6
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Position
Sna37:11837112..11850482
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AA seq
524 aa
AA seq
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MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFSVGVEE
VCCVCDAPPLKEPLINCLKCRHGYHPECHTPSIEPEADSNSWICRQCVFAVATKRGGAIK
RGRFARLMQIMKLRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLTKPLLYGDRFYEFQCSVCASGPETIQRLPMSWVDLAHLVLYHLSLCCKRKYFD
FDHEIMSFANENWDSLLLGSLSDTPRQDRCHNLLNALNSNKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDSSPLITDPPINITQRRSPLSLPCQRRAVGPESRKSKRRIMETQPCPPPVP
ATPIDLVPCCHGYVGGTNLYNSRKSEEELNLGSPPKRMFALYHPTYNGAPAISRTLHHYS
AEDPCRVPPPCLPFSLSSSHHHNHHHHNNHHHQQHQPGQKLDPCPSLLLRDVPSYPGGVG
GGGGGDGSAVRGWGGGDGVRILARRVTPDGKVQYLVEWGNVSVY
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtaagtgaaggggatgatgtgttagctcgatggagtgatggactactgtac
ctcggtaatgtgaaaagagtagatggagtcaagcagtgttgtctggtgagatttgaggac
aactcggaattctgggttctaagaaaagacattcattctttctcagttggagtggaagag
gtttgctgtgtctgtgatgccccgcctcttaaagaacctctcatcaattgtcttaaatgt
cgtcacggttatcatcctgagtgccacactccgtccattgagccggaagctgacagcaat
tcttggatatgtcggcaatgtgtctttgcagtggcgaccaagagagggggagccatcaaa
cgaggacggtttgcccggctcatgcaaatcatgaaacttcggctgccctatcagctgtca
tctttagactgggacccacagcatctgaccaaccagcagcagtgttactgctactgtgcc
ggacctggagagtggaacttgaaaatgttgcagtgtggaagttgtggtcagtggtttcat
gaagcttgcacacagtgtctgaccaagccgttgttatatggagacaggttttatgagttc
cagtgctcagtctgtgcaagcggaccagagacaattcaacggctacccatgagctgggta
gatttggcccatttggtgctctaccacctctccttgtgctgcaagagaaaatactttgat
ttcgaccatgaaatcatgtcgtttgccaatgagaattgggactctttgcttctaggctcg
ctctctgacacaccaaggcaagatcgctgccacaatctgctcaacgctttgaactccaac
aaagacaggtttgtctctggtaaagagatcaagaagaagaagtgtctttttgggctccag
gtccgagctccgcctcccctgacctctgattcgtctcccctcatcactgacccgcccatc
aacatcacccaaaggagaagcccattgtcactgccctgccagaggagagcggtggggcca
gagtcacgcaaatcaaagcggcgcatcatggagacacagccttgtccgcccccggtccca
gccaccccaatagatcttgtgccatgttgccatggctacgtaggtggaactaacctctac
aactccaggaagtcggaggaggagctgaatttgggctctccacctaagcggatgtttgcc
ctgtatcaccccacctataacggagccccagccatctccagaaccctgcatcactatagt
gcggaagatccttgtagagtgccgcccccctgcctccccttttccctgtcatcctcccac
catcacaaccaccaccaccacaacaaccaccaccaccagcagcaccagcctggccagaag
ttggatccctgcccctccctcttgctgcgtgatgtcccttcctatccgggcggcgtgggg
ggagggggcgggggggatgggtcagctgtcaggggctgggggggcggggacggggtgagg
attttggcgaggcgagtaacgccagacgggaaggtccagtacctcgtggagtgggggaac
gtgagtgtgtactga
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