Salvelinus namaycush (lake trout): 120033625
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Entry
120033625 CDS
T07522
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120033625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120033625
Ion channels [BR:
snh04040
]
Ligand-gated channels
GABA-A
120033625
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
120033625
NCBI-ProteinID:
XP_038835986
UniProt:
A0A8U0Q4F6
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Position
Sna40:9507638..9532459
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AA seq
479 aa
AA seq
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MWAFLSGKLFSVLSAPVIVAVVCCAQSVNEPGNMSFVKETVDKLLKGYDIRLRPDFGGAP
VAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYLGIPLNLTLDNRVADSLWVPD
TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWKGGDNAVTGVTRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLK
RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKI
PYVKAIDMYLMGCFVMVFLALLEYAFVNYIFFGRGPQMQKKLAEKAERANNERAAKYDTN
RAESHGNILLTTLEIHNEVAGNEVTTSLADSRNSSVMGFDNTSTGTGVQCRKASRASVPR
HSFDRHAQLKRHKLRRRSSQLKIKIPDLTDVNAIDRWSRIIFPSVFSLFNLIYWMYYVN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcttttctgagtggaaaattatttagtgttctttcagcaccagtgattgtagct
gtcgtttgttgcgcacaaagcgtgaatgaaccagggaacatgtcgtttgtgaaagagacg
gtggacaaactactaaagggctatgatattcgtcttcgaccagactttggaggggcccct
gttgcagttggcatgagtatagatgtggcgagcatagacatggtatcggaagtcaacatg
gactacactttaaccatgtacttccagcagtactggagggacaagaggctggcgtactta
gggatcccactgaacctcaccctggataaccgggtagcagattcactctgggtccctgac
acctacttcctgaatgacaagaagtccttcgtccacggtgtgacggtcaagaaccgcatg
atccgcctccacccggatggaacagtgctctacggcctgaggatcacaacgacggcagcc
tgtatgatggacctgaggaggtaccctctggacgagcagaactgcactctggagatcgag
agctatggatacacgacagatgacattgagttctactggaagggaggagacaatgcggtg
acgggggtgacacgcattgagctgccacagttctccatagtggactacaagctggtgtcc
agaaatgttgtcttttccacaggtgcctatccacgactgtctttgagcttcaagctaaag
aggaacatcggctactttatcctgcagacctacatgccctccatcctgatcaccatcttg
tcctgggtctccttctggatcaattacgatgcctcggctgcaagagtggcattagggatc
accactgtgctcaccatgaccaccatcaacacccatctgagagagactctccccaagatc
ccctacgtcaaggccatcgacatgtacctgatgggctgcttcgtcatggtcttcctggcc
ctgctggagtacgccttcgtcaactatatcttcttcggccgaggaccacaaatgcagaag
aagctggcagagaaagccgagagggccaacaacgagagggcggccaaatacgacaccaat
cgggcggagtcccacggtaatatcctgctgaccaccctggagatccacaacgaggtggca
ggaaatgaggtcaccaccagcctggcggacagcaggaactcctccgtcatgggatttgac
aacaccagcacaggtaccggcgtccagtgcaggaaggcgagccgggcctcggttcctcgc
cacagctttgacaggcacgcccagctcaagaggcacaaactgcggcggcgctcgtcgcag
ctcaaaatcaaaatccctgacctgacggacgtaaacgccatcgacaggtggtcgcggatt
atcttcccctccgtcttctccctctttaatttaatctactggatgtattatgtcaactga
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