Salvelinus namaycush (lake trout): 120035613
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Entry
120035613 CDS
T07522
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03266
Virion - Herpesvirus
snh04081
Hormone signaling
snh04145
Phagosome
snh04148
Efferocytosis
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
snh04517
IgSF CAM signaling
snh04810
Regulation of actin cytoskeleton
snh04820
Cytoskeleton in muscle cells
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
120035613
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
120035613
04512 ECM-receptor interaction
120035613
04517 IgSF CAM signaling
120035613
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120035613
04148 Efferocytosis
120035613
09144 Cellular community - eukaryotes
04510 Focal adhesion
120035613
09142 Cell motility
04820 Cytoskeleton in muscle cells
120035613
04810 Regulation of actin cytoskeleton
120035613
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120035613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120035613
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120035613
04515 Cell adhesion molecules [BR:
snh04515
]
120035613
04090 CD molecules [BR:
snh04090
]
120035613
Membrane trafficking [BR:
snh04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
120035613
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120035613
Cell adhesion molecules [BR:
snh04515
]
Integrins
Integrin beta subunits
120035613
CD molecules [BR:
snh04090
]
Proteins
120035613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
120035613
NCBI-ProteinID:
XP_038838140
UniProt:
A0A8U0Q7P9
LinkDB
All DBs
Position
Sna3:complement(67528512..67544761)
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AA seq
787 aa
AA seq
DB search
MGTFFDRLWIFSALLLASSEVLGSNICTSRGVSTCRQCLAIHPSCAWCFKEEFGQGGSSV
SRCDLKQNLLDGGCTKEGLEFPFSTLTVQKDTPLSDKASGAADDVTQIRPQKLRLTLRPD
DARRFTVTVKQVEDYPVDLYYLMDLSYSMKDDLARLRSLGNQLAAAMGRTTSNLRMGFGA
FVDKPLSPYMYTYPEEAVSNPCYGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVSRN
RDSPEGGFDAVIQAVVCKDKIGWRGDASHLLVFTTDATTHIALDGRLAGLVQPNDGQCHI
DRDNNYDKSSSLDYPSLALITEKMSENNINLIFAVTNNVVPLYQNYSQLIPGTTVGTLSD
DSGNVIQLILDAYERIRSKVELELLGVPEDLALSFNATCLNGELIQGLKSCSGLKIGDTV
SFSVEARLRGCPKEKNRTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNGTY
ECGVCQCHPGRLGDRCECADGDYRPSDQGNCSPKPEDPICSGRGNCVCGQCSCHTSGFGK
VWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWMGENCNCSTRTDTCMSSMGLLC
SGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECKHFKRGRLFEEKSCARIC
RDEIQKVEELVFYEKNAVNCTYKDENDCVEHFQYYEDASGKSILYVMEPDCPKGPDILVV
LMAVAGAILFLGLAGLLIWKLLVTVHDRREFAKFEEERAKAKWDTANNPLYKGATTTFTN
VTYRGKS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggaactttttttgaccgactatggatattttctgctttattattagcttcttctgaa
gttcttggctcaaacatctgcacatctcgaggggtgagcacctgcagacagtgtttggct
atccaccctagctgtgcttggtgctttaaggaagagtttggccaagggggctccagtgtg
tcccgttgtgatctgaagcagaacctgttggatggggggtgtacgaaggaggggctagag
ttccccttcagtaccctcaccgtgcagaaagacacgcccctcagtgacaaggcatcgggg
gcggctgacgacgtaacccagatcagaccccagaaactacgcctcactctgagaccagat
gatgccaggcgtttcacagtgacagtgaagcaggtggaggactacccagttgacctgtac
tatctgatggacctctcctactccatgaaggacgacttggcccgcctgcgttccctgggc
aaccagctggctgcagccatgggtcgcaccaccagcaacctgcgtatgggctttggggcc
tttgtggacaagcccctgtccccatatatgtacacctaccctgaggaagctgtcagtaac
ccttgctatgggatccagacgcggtgcctgcctcagtttggctacaagcatgtgctgtct
ctgaccaagcaggtggagcgcttcaccgaggaggtggcgaagcagcaggtgtctcgtaac
agagactctccagagggaggctttgacgcggttatacaggcagtggtgtgcaaggacaag
ataggctggcgtggggatgcctcccacctgttggtgttcactaccgacgctacgacacac
atagccttggacggccggctggctggtctagtgcagcccaatgacggacagtgtcacatc
gacagagacaacaactatgacaagtcgtcatccctggactacccctctctggctctgatc
acagagaagatgtctgagaacaacatcaacctcatttttgctgtgaccaacaatgtggtg
cccctctaccagaactacagccagctcattcctggcaccacagttggaacactgtcggat
gactctgggaatgtgatccaactcatcctggatgcttacgagaggatccgttccaaggtg
gagctggagttgctgggtgttccagaggacctggctctgtccttcaacgccacctgcctg
aacggagagctcatccagggactcaagtcctgctccggacttaagatcggagacacagtg
tcgttcagtgtggaggccaggttacgcggctgccctaaggagaagaaccgtaccttcacc
attaagcctgtgggcttcaaggacgccctggaggttacggtccacttcgcctgcgggtgt
gactgtgaggccacagcccagcccgagagtcctctctgtaaccagggaaatgggacctac
gagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgctgtgagtgtgccgac
ggggactacaggccctcagaccaaggcaactgcagccccaaacctgaggaccccatctgc
agtgggaggggcaactgtgtgtgtggccagtgctcctgccacactagtggctttggaaag
gtgtggggcaaatactgcgagtgtgatgacttcaactgccttcgcttcaaaggagagatc
tgctcaggccatgggaaatgtgactgtggcttctgcaagtgtggctctgactggatgggg
gagaactgtaactgttccacccggacagacacctgcatgtccagtatgggcctgctgtgc
agcggccggggccagtgtgtgtgtggggcctgcgagtgcacccagccaggggcctacggg
gccacttgtgagaggtgtccgacctgccctgatgcctgcagcatcaaaaaggaatgtgtt
gaatgtaagcacttcaagagaggccgtctttttgaggagaaaagctgtgcccgaatctgc
agggatgaaattcagaaggtggaagaactagtcttctatgagaagaatgctgtgaactgc
acctataaggatgagaatgactgtgtagagcacttccagtactacgaggatgccagtgga
aagtccatcctatatgtcatggagcctgactgccctaaagggcctgatatcctggtggtt
ctcatggcggtggcgggggccatcttgtttctgggtctggctggcctgctcatctggaag
ctgctggtcaccgttcatgaccgccgagagttcgccaagtttgaggaggagagggctaag
gccaaatgggatacggctaacaaccccttgtacaaaggagccaccaccactttcaccaat
gtcacctaccgtgggaagtcttga
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