Salvelinus namaycush (lake trout): 120036445 Help Entry 120036445         CDS       T07522                                  Name (RefSeq) collagen alpha-2(VI) chain-like   KO K06238   collagen type VI alpha Organism snh  Salvelinus namaycush (lake trout) Pathway snh04510   Focal adhesion snh04512   ECM-receptor interaction snh04518   Integrin signaling snh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:snh00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120036445    04518 Integrin signaling     120036445  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     120036445   09142 Cell motility    04820 Cytoskeleton in muscle cells     120036445  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:snh04147]     120036445    00536 Glycosaminoglycan binding proteins [BR:snh00536]     120036445 Exosome [BR:snh04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    120036445 Glycosaminoglycan binding proteins [BR:snh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120036445  Hyaluronan   Extracellular matrix or blood plasma proteins    120036445 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA Collagen VWA_2 Motif Other DBs NCBI-GeneID:  120036445 NCBI-ProteinID:  XP_038838811 UniProt:  A0A8U0Q6N4 LinkDB All DBs Position Unknown AA seq 1072 aa AA seqDB search MAMKSVAVLMCCLAATLSQQPGRLDPHNDPELHKGSGPHTHNHTEIITIIRYWTHEDVHP TPPPPSPCDEVIECPIDLYFVMDSSESIALQQPPPGSLVKKVADWTREFALRLREEVYNR QVKISWFLGGLHFSQTQELISEITSRDNFVKKMDAIDWFKSYLGKGTYTDCALDKMTEEM QRHDLRGHNSVRFAVVVTDGHVTGAPCGGIKVSAERARDQHISLFSVAASKMVEEAGMGL IASSPAGVYRSNYMAVNVTDRKTCHSPPCDAPTGKIVTSSINQMINAMKYQAYLQCSKLR CLELPGPPGPKGNRGPKGTKGGVGLAGAKGTKGKQGDSGIEGAIGPAGHKGAIGLKGEKG EFGSDGTKGVAGGHGRNGTDGQKGKIGRIGTYGCKGDPGERGSDGYPGSAGDIGLPGDNG EKGDPGHNGKPGPTGPLGEAGPQSYPGSPGIPGSPGRKGIPGLNGGPGPKSQPGRPGDPG LKGLSGPGGPKGGKGEPGLQGKPGLHGEVGTKGSKGGPGLPGPRGHQGDNGPDGQIGAAG EPGDPGQTGPHGDPGPKGDKGRDGFNYPGLRGETGTRGDNGRPGPWGSRGNCGNKGEAGT KGPNGEPGHPGQQGVNGRRGQRGGPGAPGNPGPEGDPGLSDCDVMSYIRETCGCCDCEKR CGALDIVFVIDSSESVGLTNFTLEKNFVINTINRLGSMATHPHSETGTRVGVVQYSHNGT FEAIRLNDSNIDSISAFKVAVKNLQWIAGGTWTPSALKFAYDHLIRDSRRTRAKVSVVVI TDGRFDPRDDDSLLTYLCNDTSVDVNAIGVGDMFGREGQHESLESIACQRHDRVTGMTRF ADLVADNFIDRMESVLCPEPIIVCPDLPCVTEPEVAQCIDRPVDLVFLLDGSERLGHENF NQVRYFVQHLANHLTLAHSKNDGQGARMALLQYGGENEHHLAFHMTHDLPSILEGLASMD YHDMSSSTVGAAISHTVDHVLTRLNARQTRRHAELNFVFITDGVTGRKGLEEGVDAMRNN QAVSTVIAMGTDVEQEVLEKLALKDQYAIFKGTDFSELNKHSFLDRFLQWVC NT seq 3219 nt NT seq  +upstreamnt  +downstreamnt atggctatgaaatcagtggctgtattaatgtgctgccttgcagcaaccctttcacaacaa cctggaagactagacccacataatgatccagaacttcacaaaggatcaggaccccacact cacaatcacacagaaatcatcaccatcatacgctattggacccacgaagatgtccatcct acaccccctcctccatccccctgtgatgaagtgattgagtgtcccattgacctgtacttc gtgatggactcctctgagagcatcgccctgcagcagccccctccgggaagcctggtgaag aaggtggcagattggacgagggagtttgccctgaggctccgggaggaggtgtacaacaga caggtgaagatcagctggttcctggggggactccacttctcccagacacaggagctcatc agtgagatcaccagcagagacaactttgtcaagaaaatggatgctatcgactggttcaag tcttacctgggtaaaggtacctacactgactgtgccctggacaagatgaccgaggagatg cagcgccacgacctccggggtcacaactctgtccgcttcgctgtggtggtcactgacggc catgtgactggcgccccctgtggggggatcaaggtgtctgcagaacgggctagagaccag cacatcagcttgttctcagtagctgcttccaagatggtggaggaagcagggatggggctg atcgctagctcgcctgcgggggtctaccgctccaactacatggctgtcaatgtcacagac cgtaaaacctgtcacagtccaccgtgtgacgcccctactgggaaaatagtcacatcatcc atcaaccaaatgatcaacgctatgaaatatcaagcctatctgcagtgctccaaactccgg tgtctggagcttccaggccccccaggtccgaagggaaacagaggacctaagggaacgaaa ggaggagttggactcgctggcgctaaagggaccaagggcaaacagggggactctggtatt gaaggtgcaatcggtcccgcaggtcataagggtgcgattggtctgaaaggtgaaaagggt gaatttggatcagatggaaccaagggagtggcaggaggacacggcaggaatggaacggat gggcagaagggtaaaattggtcgaatcggaacttatggttgtaaaggagatccaggagaa aggggctcagatggttatccaggaagtgctggtgatatcggactgcccggtgacaacgga gagaagggagaccctggtcataacggaaaaccaggtcccactggccctcttggagaagct ggaccacagagttatccaggaagtcctgggattccaggctcaccaggaaggaagggaata ccaggactcaacggtggaccgggaccaaaaagccaacctgggcgaccaggagaccctgga cttaagggacttagtggaccaggcggacctaaaggaggcaagggtgaacctggtctacag gggaagccaggtctgcatggggaggtcgggaccaaaggatctaagggaggtccaggactg cccggtccaagaggacatcaaggagataatgggccagatggacagatcggagctgctgga gagcctggtgatcctggacagactggaccccatggagatcctggaccaaagggtgacaaa ggaagagatgggttcaactatccgggactaagaggagaaacgggaaccagaggggacaat ggacgtccaggcccttggggaagcagagggaactgtggcaacaaaggagaagctgggacg aaaggaccaaatggtgaaccgggacatccagggcaacagggagtgaatgggaggagagga caaagaggaggccctggggctcctggtaatcctggaccagagggagaccctggcctttct gactgtgatgttatgagctacatcagagagacatgtggttgttgtgactgtgagaagaga tgcggggcgctggacattgtgtttgtgattgacagctcagagtcagtgggcctgaccaac ttcaccctggagaagaactttgtcatcaacaccatcaacaggctgggatccatggcaaca cacccacattcagagacaggaaccagggttggtgttgtgcagtacagtcacaacgggacc ttcgaggccatccgacttaatgactccaacatagactccatctctgccttcaaggtggct gtgaagaacctccagtggatagccgggggcacttggactccctccgctctgaagtttgcc tacgaccacctgatcagggacagccggcggaccagagccaaggtgtcggtcgtggtcatc acggacggacgcttcgacccgcgggatgatgactctctgctgacctacctctgcaacgac accagcgtggacgtgaacgccatcggggtcggggacatgttcggccgggaaggacagcac gagagcctggagtccatcgcatgccagaggcatgatcgcgtgacggggatgacacgtttc gctgacctggtggcggataactttatagacaggatggagtccgtgctctgccccgagccc atcattgtttgccctgacttgccctgcgtaacagaaccagaggtggcacagtgtattgac agacctgtagatctggtgttccttctggacggttctgagcgtctcggtcatgagaacttc aaccaagtccgttacttcgtccagcacttggcgaaccacctgacgctggcgcacagcaag aacgacggccagggagcccgcatggcgctgctgcagtacggaggagaaaatgagcatcac ctggcctttcatatgacccacgaccttccgtccatcctagagggtctggccagcatggac tatcatgacatgtcttcttctacggtgggggcggccatctcacacaccgtagaccacgtc ctgacgcggctcaacgcccgccagaccagacgccacgccgagctcaacttcgtcttcatc actgacggcgtcaccgggaggaaggggctggaggagggggtcgacgccatgcgaaacaac caggcagtctccacggtgatcgccatggggaccgacgtggaacaggaagtgttggagaag ctggccttaaaggaccagtacgccatctttaaaggaacagacttctctgagctcaacaag cacagcttcctagatcggttccttcagtgggtctgttag

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