KEGG   Salvelinus namaycush (lake trout): 120037214
Entry
120037214         CDS       T07522                                 
Symbol
cstf1
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    120037214 (cstf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snh03019]
    120037214 (cstf1)
Messenger RNA biogenesis [BR:snh03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     120037214 (cstf1)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR5 CSTF1_dimer Beta-prop_WDR3_1st WDR55 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_EML Beta-prop_RIG_2nd EIF3I WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_Aladin Frtz
Other DBs
NCBI-GeneID: 120037214
NCBI-ProteinID: XP_038839317
UniProt: A0A8U0U3Q8
LinkDB
Position
Unknown
AA seq 276 aa
MYRPKPTLRDRQHLYRLIISQLLYDGYTNIANNLITEVKPQSVVSPSENLMQLAKIGMEN
DDSAVQYAIGRSDTVAPGVGIDLEFDADVQSMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKVLDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKHVQEAEMLRAISFHPSGDFLLVGTQHPT
LRLYDVNTFQCFVSCNPLDQHTDTISGVNYNPNANR
NT seq 831 nt   +upstreamnt  +downstreamnt
atgtatcgtcccaaaccgacgctgcgggaccggcagcacctgtaccggctgatcatcagc
cagttgctgtatgacggttacaccaacatcgccaacaacctcatcacagaggtgaagcca
cagagcgtcgtgtcgccctctgagaacctcatgcagctggccaagataggcatggagaac
gatgacagcgcggtgcagtatgccatcgggcggtctgacacagtggcaccaggcgttggc
atcgacctggagtttgacgctgacgtccagtccatgtcccccgaggcgtctgagtacgag
acttgttacgtgacgtctcataagggtccgtgtcgcgtggccacctatagccgggacggg
cagctcattgctacgggctctgcagacgcctccatcaaagtcctggacacagagcgtatg
ctggccaagagtgccatgcccatagaggtgatgatgaatgagacggcccagcagaacatg
gagaaccaccctgtgatcagaacactgtacgaccacgtggatgaggttacgtgtctggcg
ttccaccccacggaacagatcctggcgtctgggtcacgtgactacaccctcaaactgttt
gactactccaagccctctgccaagagagccttcaaacatgtacaggaagcggagatgctg
cgggccatctccttccacccgtcaggagacttccttttggtggggacgcagcacccgacc
ctccgcctctacgacgttaacaccttccaatgcttcgtctcctgcaaccctctagaccag
catactgacaccatcagtggagtcaactacaaccctaatgctaacaggtaa

DBGET integrated database retrieval system