Salvelinus namaycush (lake trout): 120044794
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Entry
120044794 CDS
T07522
Name
(RefSeq) BDNF/NT-3 growth factors receptor-like
KO
K04360
neurotrophic tyrosine kinase receptor type 2 [EC:
2.7.10.1
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120044794
04020 Calcium signaling pathway
120044794
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
snh01001
]
120044794
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120044794
Protein kinases [BR:
snh01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
120044794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
Ig_2
LRR_8
C2-set_2
ig
LRR_5
LRRCT_2
LRR_4
Haspin_kinase
DUF2448
Motif
Other DBs
NCBI-GeneID:
120044794
NCBI-ProteinID:
XP_038845395
UniProt:
A0A8U0QL43
LinkDB
All DBs
Position
Sna3:12049525..12082702
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AA seq
793 aa
AA seq
DB search
MGSNVGGYGMARSGIFIVLMGLWRFSSACPASCTCSISRLVCIDPDPGIEDFPILTLDDM
EMDINITDIYIANQNQLFDINDNSLKYYSNLRNLTVTNTGLTSISSEAFLNNTGLQYLNL
RDNNLSTLSWRTFINLNMTSFPLLSGNPLECVCENMWIKLRLQEDLDSSESQELKCIDDL
GVRRAITRLIFPDCEAPAVEVSPSIVTKTEGSDVTAVCSATGSPAPEISWNLDTLFTSHE
VNVLGLESNLTLSGLSPSDNGRVITCNVENVVGQTEAYLQLNILFCPTILELLEPLRLHH
WCIPFSVTGNPKPKLQWYHQDQELHEQEYIKTEIHKSLGSVHHGCLQLANPTHIHNGQYT
LVARNEFGEDQKVVDAHFLLPPDEGDYPSDSPLPPIDDSVAVYVVVGIAGVAFIVCVLMV
IILKYGRNSKFGMKGSSSSVISNDDDSASPLHHVSNGNNTPSSEMSHDAVIIGMTKIPVI
ENPQYFRQSGSMLKSDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLTPDQDKILVAV
KTLKEASESGRADFHREAELLTNLQHEHIVTFYGVCVDSDPLIMVFEYMKHGDLNNFLRS
HGPDMVLMADGQHSLMVELTQSQMLLIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL
VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRRFTTESDVWSLGVVLWEIFTY
GKQPWYQLSNNEVIECITQGRVLQRPRSCPKEVYDLMLGCWQREPYMRLNIKEIHSLLQN
LSKASPVYLDILG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgggctccaacgtagggggatatggaatggctcgctcgggaatctttatcgtgttgatg
gggttgtggaggtttagctctgcttgccctgcatcctgcacttgcagcatctcaaggctt
gtttgtatcgatcctgacccagggatcgaggatttccctatccttacgttagatgacatg
gaaatggacatcaacatcaccgatatatacattgcaaatcaaaatcaactatttgacatc
aatgataacagcttgaagtactactcgaatctcagaaatctaactgtgacaaatacggga
ctgacttctatctcatcagaagcctttttaaacaatacaggacttcaatatctgaatctg
agagacaataacttgtcaacactgtcctggaggacattcataaacttaaacatgacatct
tttcctctcctgtctggtaaccctctggagtgtgtatgtgagaacatgtggatcaaactg
aggctgcaagaggaccttgacagttcagagagtcaagaactgaaatgcatagatgacctt
ggagtgaggagggccatcaccagattaatcttccctgattgtgaggctcccgcagtggag
gtcagtccctctatcgtcacaaagacggagggaagtgatgtcacagcagtatgcagtgca
acagggtctcctgcccctgagatctcatggaatttggacaccctcttcaccagccatgag
gtcaatgtcttggggctggaaagcaatctgacactgtcaggtctctcgccttcggacaac
ggcagagtgatcacttgcaatgtggagaacgtagttggccaaactgaggcttacctccaa
ctcaacatcctcttttgccccactatcctggagctgctggagccattgagactccaccac
tggtgtatccctttcagtgtgaccgggaaccccaagcccaagctgcagtggtaccaccag
gaccaggagctccacgaacaagagtatatcaagactgagatacacaagagccttggaagc
gttcaccacggctgcctgcagcttgccaacccgactcacatccacaacgggcagtataca
ctggtggccaggaacgagttcggggaggaccagaaagtagttgacgcccacttcctgctc
ccgccagacgagggcgactatccctcagactcaccactacccccaatagacgacagtgtt
gcagtgtacgtagtggtgggaatcgctggcgtggcattcattgtatgtgttctgatggtg
atcattctgaaatacggaagaaactctaagtttgggatgaagggctcctcctcctcggtc
atcagtaacgacgatgactccgccagtcctcttcatcacgtctccaacggcaacaacacc
ccgtcctcggagatgagccacgatgcggtgatcattggaatgacaaagatccctgtcatc
gagaacccgcagtatttccgccaatctggcagcatgctgaaatcggacacatttgtccag
cacatcaagagacacaacattgtgctgaagcgtgagctgggagagggggcctttgggaag
gtgtttctggctgagtgctacaacctgaccccagatcaggacaagatcctggtggctgtc
aagacgttgaaagaggccagcgagagcggccgtgctgacttccaccgggaggcggagcta
ctgaccaacctgcagcacgagcacatcgtcaccttctacggcgtatgtgtggacagcgac
ccgctcatcatggtgttcgagtacatgaagcacggcgacctcaacaacttcctcaggtcc
catggtcctgacatggtgctgatggctgatgggcagcacagcctgatggtggagctgacc
cagtcccagatgctgctcatcgcccagcagatcgctgcaggcatggtctacctggcctcc
cagcactttgtccacagagacctggccacacgcaactgtctggtgggagagaacctgctg
gtcaagattggggactttggcatgtccagggacgtgtacagcaccgactactacagagtg
gggggtcacaccatgctgcccatccggtggatgcctccagagagcatcatgtaccggcgg
ttcaccacggagagcgacgtctggagtctgggcgtggtcctctgggagatcttcacctat
gggaagcagccctggtaccagctctccaacaatgaggtgattgagtgcatcacccagggg
cgcgtgctgcagcggccgcgttcttgtccaaaggaggtgtacgacctgatgctgggctgc
tggcagagagaaccctacatgagactgaacatcaaagagatccacagcctgctccagaat
ctgtccaaggcctcgcctgtctacctggatattctgggctga
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