Salvelinus namaycush (lake trout): 120045080
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Entry
120045080 CDS
T07522
Name
(RefSeq) serine/threonine-protein phosphatase 2A catalytic subunit beta isoform-like
KO
K04382
serine/threonine-protein phosphatase 2A catalytic subunit [EC:
3.1.3.16
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
snh04110
Cell cycle
snh04114
Oocyte meiosis
snh04136
Autophagy - other
snh04140
Autophagy - animal
snh04261
Adrenergic signaling in cardiomyocytes
snh04350
TGF-beta signaling pathway
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120045080
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120045080
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120045080
04136 Autophagy - other
120045080
09143 Cell growth and death
04110 Cell cycle
120045080
04114 Oocyte meiosis
120045080
09144 Cellular community - eukaryotes
04530 Tight junction
120045080
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120045080
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120045080
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120045080
04131 Membrane trafficking [BR:
snh04131
]
120045080
03036 Chromosome and associated proteins [BR:
snh03036
]
120045080
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120045080
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120045080
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Catalytic subunits
120045080
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120045080
Membrane trafficking [BR:
snh04131
]
Autophagy
Other autophagy associated proteins
Others
120045080
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120045080
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120045080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
zf-TAZ
NST1
Motif
Other DBs
NCBI-GeneID:
120045080
NCBI-ProteinID:
XP_038845879
UniProt:
A0A8U0UBB5
LinkDB
All DBs
Position
Sna1:complement(47286117..47290055)
Genome browser
AA seq
309 aa
AA seq
DB search
MEDKSFTKELDQWIEQLNECKQLTENQVRSLCEKAKEILTKESNVQKVRCPVTVCGDVHG
QFHDLMELFKIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVTLKVRYQERITILRGNHES
RQITQVYGFYDECLRKYGNANVWKSFTDLFDYLPLTALVDEQIFCLHGGLSPSIDTLDHI
RALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRA
HQLVMEGYNWGHDKNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHV
TRRTPDYFL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaatcttttacgaaggaattagatcaatggatcgaacaactaaacgagtgt
aaacaacttacggagaatcaagtcaggagtctctgtgagaaggccaaggaaatccttacc
aaagaatcaaatgtgcagaaagtgcgatgtccggtcacagtttgtggggatgttcatggg
cagttccatgacctcatggaactcttcaagattggggggaaatctcctgacacgaactac
ctgttcatgggggattacgtggatagaggctactactcagtggaaactgtcactcttctc
gtcacattaaaggtccggtaccaagaacgaatcacaattctgcgaggaaaccatgaaagc
aggcaaatcacacaggtgtatggcttctatgacgagtgcttgaggaaatatggcaatgcc
aacgtgtggaaatccttcacagacctgtttgactatctcccactaactgcacttgtagat
gaacagatcttctgcctacatggaggcctctctccttcaatagacactcttgatcacata
cgggctctggaccgcttgcaagaggtcccacacgagggtccaatgtgtgaccttctgtgg
tcagacccagatgaccgtggtggctggggtatctcccctagaggtgctggctacaccttt
ggtcaagacatctctgaaaccttcaaccatgccaacggactcacccttgtgtcccgtgcc
caccaattggttatggagggatacaactggggccatgacaaaaatgttgtcaccattttc
agtgcaccaaattattgctatcgctgtggcaaccaggcagccatcatggagctggatgat
acactcaaatattctttcctacagttcgacccggctcctcgacgcggagaacctcatgtg
actagacgcacccctgactactttctgtaa
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