Salvelinus namaycush (lake trout): 120045096
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Entry
120045096 CDS
T07522
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120045096
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120045096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_SPT8
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
120045096
NCBI-ProteinID:
XP_038845897
UniProt:
A0A8U0QM11
LinkDB
All DBs
Position
Sna3:24260896..24285587
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AA seq
1771 aa
AA seq
DB search
MAEEQCSQIEAELYYLIARFLQSGPCKKSAQILVEELEEYELIPKRWSWDGKQYKRNFQD
WVILNQHIPADYLLRVCQQIGPLIDKEAPPSVPGVQTLLGLGRQSLLRTAKSCSHTEWSG
TAVAALHRGRPPEPPVSFGKPPSIVSIMGARQATGTARFDHALPSYTYQHMKMHRRILGH
LSSVYCVAFDRSGRRIFTGSDDCLVKIWSTDDGRLLSTLRGHAAEISDMAVNYENTLIAS
ASCDKVIRVWCLRTCAPITVLQGHAASITSIQFCPAVKGPMRYLASTGADGMVCLWQWHS
LSMKFVDRPVKFIERSRPGVQISTSSFSCGGMFLATGGTDHVIRVYYLGSETPMKLSELD
AHMDKVVVVQFCNNSNSLRFVSGSRDGTARIWHYQQQEWKSITLDIATRLPGSAVVNGED
KTKLVPTMVAWDRGDRTVVTAVSNYLLKVWSSTTGQLLHVLSGHDDEVFVLEAHPFDRRI
MLSAGHDGNIYMWDLAKGAKIRNFFNMIEGQGHGAAFDCKFSADGQHFACTDSHGHLLIF
GFGCSRPYEKIPDQMFFHTDFRPLIRDANNFVLDEQTQQAPHLMPPPFLVDVDGNPHPTH
YQRLVPGRESCKEEHLVPQLGYMANGDGEVVEQVIGQLTADEGQGESPLDVLIRQLQNQP
DERRDQEREPEGEGAAERPEVVGSPPNVGLRRSGQVEGVRQMHHNAPRSQMATERDLLAW
SRRVVVNEVQQGVLRVMEETRRAKGEVECSIYNTERRRKPVPSSSKTEQQAPCKRSLRRT
QRKKKQTRPPPAYQTRSAGERRRVDRGRISDSQMDSDSDGEAEEQAEASNASSDGETQWQ
SDSSSSVSSSDYSDWTADAGINLQPPKRTSKRQVRPPGGSSSSEEAEGQGEEAGRKQAEE
KKKKKPKQTKQKKPSSSLSLAGCDAEEWLPPSWIMETIPRRSPFVPQMGDELMYFRQGHQ
AYVRAVHRAKAYSINPQKQPWNKLNLRDQESVKVVGIKYEVGPPTLCCLKLAFLHPISGK
MTNESFSLKYHDMPDVIDFLVLQQFYDEAKEHNWQTGVRFRSIIDDAWWFGSVEDQQPLQ
PEYPDSLFQCYAVKWDNSEREKMSPWDMEPISDEAELPEEVGDGVGVTEEEVKARLYSPQ
EGEWGAHSQDEDCQRVIFGINELLTLDLAKAFASPVDLRDYPLYCTVVAYPTDLSTIRRR
LENRFYRRISALMWEVRYIEHNARTFNEPQSPIVAAAKVVTDVLLRYIGDQSCTDILDLC
HKVKTELSSGEDETAEVDVDSDTPGTSTGQQRANPSPKKRGVVLDVRAWRGQCRELLRRM
MDGPDSEPFRQPVDLFTYPDYRDIIDTPMDLGTVTEALVVGNYENPMEFAKDVRLIFSNS
KAYTPNKKSQIYTMTLSLSAFFERQIISIISDYKSAVQNQRRRSRQSVSYRKRLNSGGSS
PPTSRPSSPKGKHKSGKKATPKKSQPSSKSQSRRPSQASESSSVVVDEDSQPSSSSSSGT
GSHIGGPGADRVTRSRTTPIKNSERNRPLTNGARQSHRRRVLQEGEESGGSNSSSSSSSS
SSSLSSSSSDSDSDSESEVGKFVEGGDHDYSKAPRLKTRHKAKGKMAVSGKRRRKEEQEA
EEAPERAKRARVQAEVEEEEDEEDDDEQAEDNEEEEEEEEEEPQPQLQREEEDDEEEPEE
EEEPEEKEESEEDDSEQGEGGTEGGQKSSSRSKSGQVNTRNQGRRTVLYNDESDEESGTT
EDPLNLGMSRSGRVRRMTEKARVSHLMGWNH
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaacagtgttcacaaatcgaagctgaattgtattacctcattgccagattt
ctccagtcgggaccgtgtaaaaaatcggcacagatcctggttgaggaactggaagagtat
gagttgatcccgaaacgatggagttgggacggcaaacaatacaaacgaaacttccaagac
tgggtgatcttgaaccagcacatcccagcagactacctgctgagagtatgccagcagatt
ggtcctctcatagacaaggaggccccacctagcgtccctggggtccagaccctcctgggc
ttgggaaggcagtctttgcttcgcacagctaaaagttgtagccacacagaatggagcgga
actgctgttgctgcgctgcaccggggtcgccccccagaaccaccagtcagctttgggaag
ccccccagcatcgtgtccatcatgggcgctcgccaggctactggcactgcccgcttcgac
catgccctgccgtcctacacctaccagcatatgaagatgcacaggcgcatcctgggccac
ctgtcctctgtgtactgtgtggccttcgaccgcagtggcaggcggatatttacgggttct
gatgactgtctggtgaagatttggtccacggatgacggccggctgctgtccaccctgcgc
ggccatgcggccgagatctccgacatggcagtgaactacgagaacacgctcatagcctcg
gccagctgtgacaaggtcatccgagtgtggtgcctgcgcacctgcgcccccatcactgtg
ctgcagggccatgcagcctccatcacctccattcagttttgtccggcggtaaaaggaccg
atgcgctacctggcctccactggcgcagacggcatggtgtgtttatggcaatggcactcg
ctcagcatgaagtttgttgaccggccagtcaagttcattgagcggtcaaggcccggggtc
cagatctccacctcctccttcagctgtggtgggatgttcctggccacgggcggcactgat
catgtgatcagggtgtattacctcggctctgaaacacccatgaagctgtctgagttggat
gctcacatggacaaagttgtggtagtccagttttgtaacaacagtaacagcctgaggttt
gtgagtggcagtcgggacggcacggctaggatctggcattaccagcagcaggagtggaag
agcattactctggacatagccaccagactaccagggagtgctgttgtgaatggcgaggac
aagaccaagctggtgccgacgatggtggcctgggaccgcggtgaccgcacggtcgtcaca
gcggtctctaattacctgctcaaagtgtggagctccaccacgggccagctgctgcatgtg
ctgtctggtcatgatgatgaggtgtttgtcttggaggcccacccatttgaccgccgcatc
atgctgtctgccggtcacgacggcaacatctacatgtgggacctcgccaagggagcgaag
atccgcaacttcttcaacatgattgagggccaaggccacggtgcagcgtttgactgtaag
ttctcagctgatggacagcactttgcctgcactgactcccatggccacctgctcatcttt
ggcttcggctgcagcagaccctatgagaagattcctgatcagatgttcttccacactgac
ttccggcccctgatccgggacgccaacaactttgtcctggacgagcagacccagcaggcg
ccccacctcatgccccctcctttcctggtggacgtggacgggaacccccaccccacccac
taccagcgcctagtgcccggcagggagagctgcaaggaggagcatctggtgccccagctg
ggctacatggccaatggcgatggtgaggtggtggagcaggtgattggccagctaacggca
gatgagggtcagggagaaagcccattggatgtcctgatcagacagttgcaaaaccagccg
gatgagaggcgggaccaagagagagagcctgaaggagagggggctgctgagagaccagag
gtagtgggatcgccccctaacgtgggcctgaggaggagtggtcaggtggagggggtgcgt
cagatgcaccacaacgcccctcgcagtcagatggccacggagagggacctgctggcctgg
agcaggagggttgtggtcaacgaagtccagcaaggagtcctccgggtgatggaggagacc
agacgggccaaaggtgaggtggagtgttccatctacaacacagagaggaggaggaagcct
gtacccagttcttctaagactgagcagcaggctccctgcaagcgctccctgcggcggacc
cagaggaagaagaagcagaccagacctccaccagcgtaccagacccgctcagcaggagaa
cgtcgccgtgtggacagggggaggatctctgacagccagatggactcggacagcgatgga
gaggcagaggagcaggcagaagccagcaacgcttcctctgatggggaaacacagtggcag
agtgacagcagttccagtgtctcctccagtgactactctgattggacagctgatgcgggg
atcaacctccagccccccaagcggaccagcaaaaggcaggtccgaccgcccggtggctcc
agcagttcagaggaggccgagggccagggagaggaggccggaaggaagcaggcagaggaa
aagaagaagaagaagcccaagcagaccaaacagaagaaacctagctcgtctctgtctctg
gctgggtgtgatgcggaggaatggctgcccccctcctggatcatggagaccatcccccgc
cgctctccttttgtgccacagatgggtgacgagctgatgtacttcaggcagggccaccag
gcctacgtcagggcagtgcatagggccaaggcctacagtatcaatcctcagaaacagccc
tggaacaagctcaacctcagggaccaggagtctgtgaaggtggttggcattaagtatgag
gtgggccctcctaccctctgttgcctaaaacttgccttcctgcaccccatctcaggcaaa
atgaccaatgagtcattctccttaaagtaccatgacatgccggatgtcattgatttcctg
gtgctccagcagttctatgacgaagctaaagagcacaactggcagactggtgtgcgcttc
cggagcatcatcgatgacgcctggtggtttggctcggtggaggaccaacagccactccag
ccagagtacccagacagcctgttccagtgctacgctgtcaagtgggataatagtgagagg
gagaagatgagcccttgggacatggagcccatttctgatgaagcggagttgccagaagag
gttggtgacggggtgggggtgacagaggaggaggtgaaggctcggctctacagcccccag
gagggggagtggggggctcactcacaggatgaggactgccagagggtcatctttggcatc
aacgagctgcttacactggacctggcgaaggcgtttgcgtcacctgtggacctgcgggac
taccccctctactgcactgtggtggcctaccccactgacctcagcaccatccgcagacgg
ctggagaaccgcttctacaggaggatctcggctctgatgtgggaagtgcgctacatcgag
cacaacgcccgcactttcaacgagccccagagccccatcgtggcagcagccaaggtggtg
actgacgtgctcctccgctacatcggggaccagagctgcacagacatcttagatctgtgc
cacaaggtgaagacggagctgagcagtggagaggacgagactgctgaggtggacgtggac
tctgacactccagggacatccacaggacaacagcgggccaatcccagtcctaaaaagcgt
ggggttgtgttagatgtgcgtgcgtggcggggccaatgtcgggagctgctgcggcgtatg
atggacggccctgactctgagcccttcagacagcctgtggacctcttcacctacccagac
tatcgagacatcatagacactcccatggacctggggactgttacagaggcgctggtcgtc
ggaaactacgagaaccccatggagtttgccaaagatgtccgtctcattttcagcaactcc
aaagcatatacacctaacaagaagtcacagatctacaccatgaccctgagcctatcagcc
ttctttgaaagacaaatcatctccatcatctccgactacaagtctgcagtccagaaccag
cggaggaggagtcgccagagtgtcagctacaggaagaggctgaacagtggaggcagctcc
cctcccaccagccgaccctccagtcctaaagggaagcacaagtcggggaagaaggcaaca
cccaaaaaatcccagccctcatctaagagccagtctcgcaggccatctcaggcgtcggag
tcgagcagtgtggtggtggatgaggacagccagccctcgtcctcctccagctccgggaca
ggcagccacattgggggcccaggggctgaccgtgtcactcgcagtcggaccacacccatc
aagaactctgagcgtaacagacctctcaccaatggtgccagacagagccaccggcgaaga
gtgctgcaggagggggaggagtctggaggatccaatagctcctcctcttcatcatcgtct
tcctcatcattgtcctcctcctcatcagacagtgattcagacagtgagtcggaggttggg
aagttcgtggagggaggagatcacgactacagcaaagctccccgcttaaagacccgccac
aaagccaagggcaagatggccgtttctgggaagaggaggcggaaagaagaacaggaggcg
gaggaggctccagagagagccaagagagcacgagtccaggcagaagttgaggaggaggaa
gatgaagaagatgacgacgaacaagctgaagacaatgaggaggaggaggaagaagaggag
gaggagccacagccgcaactgcagagagaggaggaggatgacgaggaggagcctgaggag
gaagaggagcctgaggaaaaggaggaatcggaggaggacgactctgagcagggtgagggt
gggacggagggcggtcagaaaagcagtagccgcagtaagtctggtcaggtgaacacccgg
aaccagggccgcaggacagtgttgtacaacgacgagtcagatgaagagtcggggaccaca
gaggaccccctcaacctaggcatgtcccgctcaggacgggtacgccgcatgaccgaaaag
gcccgtgtcagccacctcatgggctggaaccactga
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integrated database retrieval system
